Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00908 ATGGAAATGGGGACTGTTGCATGGATTTCCTTGGTGATTATCGTGACAGTTTTCTGCCCTTCCTCTCTTGCTCTCACTCTGGATGGTATGACCTTGTTGGAAATCAAAAGCACTTTGAATGATACTAAGAATGTTCTGAGCAACTGGCAACAGTTTGATGAGTCTCATTGTGCATGGACTGGTATCTCTTGTCATCCTGGTGATGAACAAAGAGTTCGCTCAATAAATCTTCCATACATGCAACTTGGAGGGATTATTTCTCCAAGCATTGGTAAGCTCAGCAGACTACAGAGATTGGCACTTCATCAGAACAGCTTGCATGGAACCATTCCTAATGAACTTACCAATTGTACTGAGCTAAGAGCACTGTACTTGAGGGGTAATTACTTCCAAGGAGGCATACCATCAAATATTGGAAACCTTTCATATTTAAATATACTGGATTTATCAAGCAACTCATTGAAAGGTGCTATACCTTCCTCTATTGGCCGTCTCTCACATTTGCAAATTATGAACTTGTCTACCAATTTCTTCTCTGGTGAAATTCCCGACATTGGAGTATTAAGCACCTTTGACAAGAACTCGTTTGTTGGCAATGTAGATCTTTGTGGGCGACAAGTCCAAAAGCCATGTCGAACATCACTTGGTTTCCCTGTGGTGCTACCACATGCTGAAAGTGATGAAGCTGCAGTCCCTACCAAAAGGCCTTCACATTACATGAAGGGGGTGCTAATTGGAGCAATGGCAATTTTGGGTCTCGCACTTGTCATAATCCTTTCATTCCTCTGGACTCGTTTGTTATCAAAGAAGGAACGAGCAGCAAAGAGATACACTGAAGTCAAGAAACAAGCTGATCCAAAAGCAAgcacaaaacttattaccttccatggtgatctgccatacacATCATCTGAGATCATAGAGAAGCTAGAGTCTCTTGATGAAGAGGATATAGTAGGATCAGGAGGATTTGGTACAGTTTACCGGATGGTGATGAATGATTGTGGTACATTTGCTGTTAAACAGATTGATCGAAGTTGTGAAGGGTCTGATCAAGTGTTTGAAAGGGAACTAGAAATCTTGGGGAGCATCAATCACATAAATCTAGTAAATCTGCGTGGTTACTGCAGGCTCCCTTCTTCGAGGCTCCTTATCTATGACTATTTGGCCATAGGCAGCTTAGATGATCTCTTGCATGAAAATACTCGACAAAGGCAACTACTGAATTGGAGTGATCGCCTAAAGATAGCTCTTGGTTCTGCCCAGGGTTTGGCatacctgcaccatgaatgcagcccaaaagttgttcattgtaacataaaatccagcaacatcctccttgatgaaaacatggagcctcatatatctgattttggtcttgcaaagcttttggttgatgaagaggcccatgttaccactgtggttgctggcacatttggttatttggcaccagAGTATCTACAAAGTGGGAGAGCAACTGAGAAGTCGGATGTATATAGCTTTGGAGTTCTATTGCTGGAACTTGTAACTGGAAAGAGGCCAACAGATCCTTCCTTTGTAAAAAGAGGGTTAAATGTGGTTGGTTGGATGAACACATTACTGAGAGAAAACCGATTAGAGGATGTGGTTGACAAAAGATGCACCGATGCAGATGCAGGAACTCTTGAAGTAATTCTTGAGCTGGCTGCAAGATGCACCGATGGAAATGCAGACGATCGTCCATCGATGAACCAGGTGTTGCAGTTGCTGGAACAGGAGGTTATGTCTCCTTGCCCCAGCGAGTTTTACGAGTCTCATTCAGATCATTAA 1809 0.3748 MEMGTVAWISLVIIVTVFCPSSLALTLDGMTLLEIKSTLNDTKNVLSNWQQFDESHCAWTGISCHPGDEQRVRSINLPYMQLGGIISPSIGKLSRLQRLALHQNSLHGTIPNELTNCTELRALYLRGNYFQGGIPSNIGNLSYLNILDLSSNSLKGAIPSSIGRLSHLQIMNLSTNFFSGEIPDIGVLSTFDKNSFVGNVDLCGRQVQKPCRTSLGFPVVLPHAESDEAAVPTKRPSHYMKGVLIGAMAILGLALVIILSFLWTRLLSKKERAAKRYTEVKKQADPKASTKLITFHGDLPYTSSEIIEKLESLDEEDIVGSGGFGTVYRMVMNDCGTFAVKQIDRSCEGSDQVFERELEILGSINHINLVNLRGYCRLPSSRLLIYDYLAIGSLDDLLHENTRQRQLLNWSDRLKIALGSAQGLAYLHHECSPKVVHCNIKSSNILLDENMEPHISDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPSFVKRGLNVVGWMNTLLRENRLEDVVDKRCTDADAGTLEVILELAARCTDGNADDRPSMNQVLQLLEQEVMSPCPSEFYESHSDH 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00908 602 PANTHER LRR RECEPTOR-LIKE KINASE 2 602 - -
Gma17g00908 602 PANTHER RECEPTOR-LIKE PROTEIN 55 2 602 - -
Gma17g00908 602 Gene3D Phosphorylase Kinase; domain 1 272 388 - -
Gma17g00908 602 Pfam Protein kinase domain 315 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma17g00908 602 Gene3D Transferase(Phosphotransferase) domain 1 389 593 - -
Gma17g00908 602 Pfam Leucine rich repeat N-terminal domain 28 64 IPR013210 -
Gma17g00908 602 Gene3D Ribonuclease Inhibitor 26 213 IPR032675 -
Gma17g00908 602 SUPERFAMILY Protein kinase-like (PK-like) 294 584 IPR011009 -
Gma17g00908 602 ProSitePatterns Protein kinases ATP-binding region signature. 319 341 IPR017441 GO:0005524
Gma17g00908 602 SUPERFAMILY L domain-like 28 185 - -
Gma17g00908 602 ProSiteProfiles Protein kinase domain profile. 313 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00908 Gma-Chr17 7757779 7762350 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00908 7 592 Receptor kinase-like Gene Family AT2G35620 48.294 0.0 550
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Gma17g00908 Pkinase 1.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00908 - - gmx:100803920 1199.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00908 17 7757779 7762350 Gma17g00908 17 7757779 7762350 ECH
Gma17g00908 17 7757779 7762350 Gma05g00293 05 2638434 2646149 GST