Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00898 ATGCCCTACGGATCCCCTCCTTCAGTTCCCGGCGAACGATCCTCGCCGGAACCCAATCCTCCGAACCATGTCTCCGATTTGAAGGAGGAAACCACCGCCGCCGCTCCTCCTCCGCTCACCACCAGGAGCACCCGCCCCTCCCGCGCGTGCACCATGCGCGCCTCCTCTCGCCTCCTTTCCTCGCCGGCGCCGTCGAAGAAGGTGGCGCGTGCGAGGAAGGAGGGTTCGCCGCGGCCACCGTCGCAATGCAGCAAGATCGTGACTCCGCTGGTGGAGCCGCCGTCGCCGTCGCAGTTGCCGCGGTGGAACCTGCGGTCGATGTGGGAGTTCGCTTCCGTGCTGAATTTCTTGCACCTGTTTAGGCCTCTTTTGAATATCTCGTTGGAATTCTCTGCGGAAGAGTTCGAGACAGCTCTTCTTGCTCCCAACGATACTTTGTTTCATATACATATGCCTTTGCTAAAGGCAATCCCTCCTATTACACGAATGGCACTCACACGCGATACTTGGATAACCGTATTATGCAGGAAATTGAGAGATTGGTGGCATTGGGTTGCTGATGGGGATCTTCCAATTGTTGCTTCACATGGGGCGGAGATTGAAATATATAAATTACTTGATCCAGGGGTCCGTGTTGTTATCTTAAAAGTATTATGTGATATTCGTGTTGAGCAAGAAGATATCCGAAGTTATATTGACAACTCAATGAAACACGGTGTTCAACTTTCAACATTCCGTAAAGAGCGTATTGGAGGTGATTCAAATGGAATTTCTTATTGGTATGAAGATGACCCCATTATTGGTCATAGGATGTATCGAGAAATAAGGAAAACCGAAGTGGTACAAATGAAGAAAGGGAAACCAAGAGGTTCCCTGGTTCTTTCTAACACATCATACCTGTGGGAAGTAATTGCTACCAATTTTGATGAATTTGAAGATGTTTCTGAGAAGCTTTTCTCAAGTAAAAACAGAACAGAGACTTCTGTGGGGAAAAGGCTGAAGATAGACATGCTTCCTGAAATTGAGAAAGTTCATAAGAAAAAGGAGAAGTTGCTGAAAAAGCAACACAGACAAGCTCTTCTGCTTGATAATTACTTGGTTGTTGACGGGCTTGGTCCTGGGCGTTCTCTTCGTGACAGGAAACCTGTTACCTACACTTTTGATGATTATGATCAGTCAATCAAGGAAGCAATTAAAGTAACCAAGCAGAAACAGTCATCTCCAGAACATATGCCCAGGAGAGAATCGGTAGCAAAAGCGGAAGCTTTGACTAATGGTAAATATGGTCCTCCATATGCTACACTAGATCGGAATTTTGGTATATCATCTCCAGAATCATCTGATTCTGATGATGACAAAGAAGATAATGAAACTGACAACTTGGATCGAAGCAATCGTCAAAGACGGAGACCTAAACGGTATACAGAAAGAGAGTTTGTTGAGGCAGTATCAGATAATGAGACAGACTTCGACAGTGATGATGATATTGTTGGAGAAGCCGTATATGATGAAGAATATCTCAAGAAACGCAAGCAGAAAAGGATGTCTTCTAGTGGCTCCGAAGGAGATGATGAAGAGTATCAGTGGGATGAATACAATGTTGAAGATGATGAAGAAGAAGATGACGATGACGATGATTCCTTAAGCATAAGTGAGGATAGTGACAAACCCCTCAAGGTCAAACAGTTGCGTGGCCGCACAAGGAGAGAAACCAAACTCAGGTCTGTGGGTGAGATACAATCCGGTCTAAGACGCAGTAAGAGGGCAACTAAAAATCGTATAAATTACCGACAATGTGAGGCATCAGAATCAGAAACAGAGTTGATCAAATCTGAGAAGTCTAATTCATCAGCTGATCACTCAGATCCCAGTGAGAATGGTGAATACATGATGGAAAGTGAAGATTCAGATGGCAGTGATAATGAAGAACAAGAAAAGAAAGTAGATGAGCCTGTTCCATATCCAGCAGTAGAAGAGAATGAACAAAACCAGCCTCCTGAAAAATTAAGCAGTCCTGGTCAGGAGGAAGTTGAGAGCAGCACAGGAAAGAGACGCTTCCTTGATTTGAATGAGCTTGCCCCTAGCACGGGTTTCGATGATGGTCCAAACACAATAATGAAAGATGAAGACAATGATTACTGA 2142 0.45 MPYGSPPSVPGERSSPEPNPPNHVSDLKEETTAAAPPPLTTRSTRPSRACTMRASSRLLSSPAPSKKVARARKEGSPRPPSQCSKIVTPLVEPPSPSQLPRWNLRSMWEFASVLNFLHLFRPLLNISLEFSAEEFETALLAPNDTLFHIHMPLLKAIPPITRMALTRDTWITVLCRKLRDWWHWVADGDLPIVASHGAEIEIYKLLDPGVRVVILKVLCDIRVEQEDIRSYIDNSMKHGVQLSTFRKERIGGDSNGISYWYEDDPIIGHRMYREIRKTEVVQMKKGKPRGSLVLSNTSYLWEVIATNFDEFEDVSEKLFSSKNRTETSVGKRLKIDMLPEIEKVHKKKEKLLKKQHRQALLLDNYLVVDGLGPGRSLRDRKPVTYTFDDYDQSIKEAIKVTKQKQSSPEHMPRRESVAKAEALTNGKYGPPYATLDRNFGISSPESSDSDDDKEDNETDNLDRSNRQRRRPKRYTEREFVEAVSDNETDFDSDDDIVGEAVYDEEYLKKRKQKRMSSSGSEGDDEEYQWDEYNVEDDEEEDDDDDDSLSISEDSDKPLKVKQLRGRTRRETKLRSVGEIQSGLRRSKRATKNRINYRQCEASESETELIKSEKSNSSADHSDPSENGEYMMESEDSDGSDNEEQEKKVDEPVPYPAVEENEQNQPPEKLSSPGQEEVESSTGKRRFLDLNELAPSTGFDDGPNTIMKDEDNDY 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00898 713 MobiDBLite consensus disorder prediction 36 62 - -
Gma17g00898 713 MobiDBLite consensus disorder prediction 640 654 - -
Gma17g00898 713 MobiDBLite consensus disorder prediction 501 521 - -
Gma17g00898 713 MobiDBLite consensus disorder prediction 458 484 - -
Gma17g00898 713 MobiDBLite consensus disorder prediction 523 550 - -
Gma17g00898 713 MobiDBLite consensus disorder prediction 401 417 - -
Gma17g00898 713 MobiDBLite consensus disorder prediction 401 713 - -
Gma17g00898 713 MobiDBLite consensus disorder prediction 1 96 - -
Gma17g00898 713 MobiDBLite consensus disorder prediction 598 619 - -
Gma17g00898 713 MobiDBLite consensus disorder prediction 663 677 - -
Gma17g00898 713 MobiDBLite consensus disorder prediction 1 17 - -
Gma17g00898 713 MobiDBLite consensus disorder prediction 485 500 - -
Gma17g00898 713 PANTHER REMODELING AND SPACING FACTOR 1 23 712 IPR028938 GO:0006355|GO:0031213
Gma17g00898 713 PANTHER DDT DOMAIN-CONTAINING PROTEIN DDR4 23 712 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00898 Gma-Chr17 7632084 7640318 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Gma17g00898 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00898 - - gmx:121173822 1335.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00898 17 7632084 7640318 Gma17g00898 17 7632084 7640318 ECH
Gma17g00898 17 7632084 7640318 Gma05g00303 05 2770840 2779869 GST
Gma17g00898 17 7632084 7640318 Gma04g01706 04 46243911 46254461 PCT
Gma17g00898 17 7632084 7640318 Gma06g01686 06 16850669 16859261 PCT
Gma04g01706 04 46243911 46254461 Gma17g00898 17 7632084 7640318 PCT
Gma06g01686 06 16850669 16859261 Gma17g00898 17 7632084 7640318 PCT