Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00883 ATGTCAGCCCCAAGTCAAACAATTGTAATAACAGCGACAGCTACTGCAGCCACTATGTTACTTTTTGCTGTGACATTTTTTTACTTCCAAAAATTTGTTCTTGCTCGATACCACCATCGGTACATAGTTGCAACAAGTTTTCTTAGAGAAGCAGGATTGAACAATGAGGATATAAAGAAAGTTGGTGGCAATATGAAAGGATTACTTGTTGAAGAAAATGGGATTGATATTCTGTATATGATGGAAACAGAAGGTGGGCAATTCAAAACTAGATTTCCAAATGGAAGATACAATCCTAGTTATGAAGACGATGAAGAAAAGGGAACAGATATAATGGTCCAGAGATCCAAACGAATTAAGCCTCAGGATGTTACAGTTCCACTGCCTTGTGAAATTCTAGGGTCAGCTCTCTCATGTAAAAGCACATATGGGAAGACTACTAGTTTGCTTCACTTTATTATTGAGCCGGTAGCTCAGTTTGAAGCAAGACAACAAGCTAGTAATCAAAAGCACAACCTTAACAGTAGCACTGGTGAAACAAGCAACACCAATGAACCACATTCAGATAACCGGGTACAAAAAGAGGAAGTTAAAGAGTATCTAGTGTTAGGAGGTCTAAGGGACGAGTTATGTGAAGTAAAGAAAGCAGCAAGCATTGAGCATCAGAATTTCTCTAGTATGTACTCTATTCCCAATGCTTATGTTACTAAAATTCGACAGATTATAACATGCTTTGGCAACAGTGAGAGGGGTGGATTTATTAAGGTAATGAAAGGGTTTCCAGAGGAATGTGAAGTGGAGCCTAAGGTGGTGAGAGAGGAACAAGAAATGGTCATGGAACTGCTGAAGAAAACCAATGAGTATTATCTAACAGGAGGTTCCAAAGATAACATATCGAACCCCTTTCAACTGTTTATTACAGTAAAAGAATTTCTTGACATGGTAGATGAGGTTTGCAAAGAACTTAGAAGGCAGCTAGAAAAAACTAATGCAGGAGGAGAAGCTGTATCAACACCACCACTTTCACCATCAAAGAGGGCACCACTCAGATTAACAAACTTCAATTACATTTTCGGCCAAGCACGTCAGGAGTAA 1095 0.389 MSAPSQTIVITATATAATMLLFAVTFFYFQKFVLARYHHRYIVATSFLREAGLNNEDIKKVGGNMKGLLVEENGIDILYMMETEGGQFKTRFPNGRYNPSYEDDEEKGTDIMVQRSKRIKPQDVTVPLPCEILGSALSCKSTYGKTTSLLHFIIEPVAQFEARQQASNQKHNLNSSTGETSNTNEPHSDNRVQKEEVKEYLVLGGLRDELCEVKKAASIEHQNFSSMYSIPNAYVTKIRQIITCFGNSERGGFIKVMKGFPEECEVEPKVVREEQEMVMELLKKTNEYYLTGGSKDNISNPFQLFITVKEFLDMVDEVCKELRRQLEKTNAGGEAVSTPPLSPSKRAPLRLTNFNYIFGQARQE 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00883 364 MobiDBLite consensus disorder prediction 164 191 - -
Gma17g00883 364 Gene3D Formin, FH2 domain 130 335 IPR042201 -
Gma17g00883 364 PANTHER FORMIN-LIKE PROTEIN 139 358 - -
Gma17g00883 364 PANTHER FORMIN-LIKE PROTEIN 3 122 - -
Gma17g00883 364 PANTHER FORMIN-RELATED 139 358 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Gma17g00883 364 PANTHER FORMIN-RELATED 3 122 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Gma17g00883 364 SUPERFAMILY Formin homology 2 domain (FH2 domain) 138 330 - -
Gma17g00883 364 Pfam Formin Homology 2 Domain 138 315 IPR015425 -
Gma17g00883 364 MobiDBLite consensus disorder prediction 164 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00883 Gma-Chr17 7486345 7488703 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00883 140 344 FH2 protein (formin) Gene Family AT1G70140 35.211 3.27e-27 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00883 - - gmx:100795805 416.387