Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00879 ATGGTTTTCTGTGAACTGACATTAACTTCCTCTGTTTTTAAGGCTGGGATTGTGTGGATTAATTGCTCTAAACCGTGCTTCACTCAAGCACCATGGGGAGGCATTAAACGCAGTGGTTTTGGTCGTGAATTAGGAGAATGTTTGTTGACCATCAGATTTTGTACAACCAAATTCAATCAAGGGTCGATAAAGCTGTCAGAGGAGGAATGCGACAATGGCAAAGAGGGTAAGTGA 234 0.4231 MVFCELTLTSSVFKAGIVWINCSKPCFTQAPWGGIKRSGFGRELGECLLTIRFCTTKFNQGSIKLSEEECDNGKEGK 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00879 77 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 32 49 IPR016162 GO:0016491
Gma17g00879 77 SUPERFAMILY ALDH-like 11 58 IPR016161 GO:0016491
Gma17g00879 77 Pfam Aldehyde dehydrogenase family 12 48 IPR015590 GO:0016491
Gma17g00879 77 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 12 31 IPR016163 GO:0016620
Gma17g00879 77 PANTHER BETAINE ALDEHYDE DEHYDROGENASE 10 49 - -
Gma17g00879 77 PANTHER BETAINE ALDEHYDE DEHYDROGENASE 1, CHLOROPLASTIC 10 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00879 Gma-Chr17 7459611 7460610 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00879 10 46 Aldehyde Dehydrogenase Gene Family AT1G74920 86.486 8.09e-20 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00879 K00130 - gmx:100170731 78.5666