Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00878 ATGTCCTACTCTCTTTCTAAAGTAAAGGACAGTTATGCTCTGCTGGCTATATATATTTTTGAGAGGGAGTCAGAGAAGAAAGAACCTTCTCCGGATCATTGTTATGAAAAGATATTGAAGTTTATCTCGAATGCTAAGAGTGAGGGTGCAACCATTTTGACCGGTGGGTCTCACCCGGAGCATCTAAAGAAGGGATTCTTTGTTGAACCAACTGTCATAACTGACGTGACTACCTCCATGCAAATTTGGAGAGAAGAAGTATCTGGACCTGTTCTGTGTAAAAACATTTAG 291 0.4055 MSYSLSKVKDSYALLAIYIFERESEKKEPSPDHCYEKILKFISNAKSEGATILTGGSHPEHLKKGFFVEPTVITDVTTSMQIWREEVSGPVLCKNI 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00878 96 PANTHER BETAINE ALDEHYDE DEHYDROGENASE 1, CHLOROPLASTIC 34 94 - -
Gma17g00878 96 SUPERFAMILY ALDH-like 34 93 IPR016161 GO:0016491
Gma17g00878 96 Pfam Aldehyde dehydrogenase family 35 93 IPR015590 GO:0016491
Gma17g00878 96 PANTHER BETAINE ALDEHYDE DEHYDROGENASE 34 94 - -
Gma17g00878 96 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 35 93 IPR016163 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00878 Gma-Chr17 7458922 7459563 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00878 35 93 Aldehyde Dehydrogenase Gene Family AT1G74920 88.136 1.63e-31 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00878 K00130 - gmx:100170731 117.857