Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00877 ATGGCTACGTGGAAGGTTGCTCCTGCTTTGGCTGCGGGTTGTGCTGCAATATTGAAGCCCTCTGAGTTGCCGTCTGTGACGTGTTTGGAGCTTGCTCAAATTTGCCAAGAAGTCGGGCTTCCTCCTGTAGACAAGATTGCCTTTACTGGAAGCTCTGCAACTGGGAGCAAGATTATGACAGCTGCAGCTCAGCTGATCAAGCCTGTTTCACTAGAGCTTGGTGGGAAAAGCCCAATCATTGTTTTTGAGGATGTTGACCTTTACAAGGCTGCTGAATAG 279 0.491 MATWKVAPALAAGCAAILKPSELPSVTCLELAQICQEVGLPPVDKIAFTGSSATGSKIMTAAAQLIKPVSLELGGKSPIIVFEDVDLYKAAE 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00877 92 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 71 78 IPR029510 GO:0016491
Gma17g00877 92 PANTHER BETAINE ALDEHYDE DEHYDROGENASE 41 92 - -
Gma17g00877 92 PANTHER BETAINE ALDEHYDE DEHYDROGENASE 1 42 - -
Gma17g00877 92 SUPERFAMILY ALDH-like 1 91 IPR016161 GO:0016491
Gma17g00877 92 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 1 42 IPR016162 GO:0016491
Gma17g00877 92 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 79 92 IPR016163 GO:0016620
Gma17g00877 92 Pfam Aldehyde dehydrogenase family 42 92 IPR015590 GO:0016491
Gma17g00877 92 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 43 78 IPR016162 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00877 Gma-Chr17 7457625 7458549 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00877 1 92 Aldehyde Dehydrogenase Gene Family AT1G74920 69.298 2.28e-44 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00877 K00130 - gmx:100170731 152.525