Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00870 ATGTTGCTCGATTTCTATTTCCAACAACACCGCAGCGTCGTAGAATTACTACTCTCTTTCTTTCTTCGTCTCTTTGTTCCTTCTTCGGCCATGTCGCTCAAGCGCCGCCCCGATGATGGGAAGACTCCAGACGACAAGCGTAGAAAGCCTCCTCCTTTCTCCAGTGTGGTGCGTGACGTGATGAAGTTACAATCACTCGGGCATTTGCTGGAGCCAATTCTAGAGCCCTTGGTTCGAAAAGTGGTTAAGGAAGAAGTTGAAGCTGCCTTAAAGAGGCATTTAACCAGCATGAAACAGACCTGTGGAAAGGAGTTTCATACTACTGAATTAAGAAATTTGCAGCTGCAGTTTGAAAACAGCATTTGTCTTCCTGTCTTTACTGGAGCTCGAATTGAAGGAGAGGATGGCTCCAACTTAAGAATAGGTTTAGTTGATGCCCTAACTGGGAAGGTTGTTAGTACAGGACCTGAATCGTCGGCTAAGGTGGAAATTGTAGTCCTTGAGGGTGATTTTGAAGAAGAAAGCGAAACTTGGATGCCTGAAGAGTTCAAGAGCAATATTGTGAGAGAGAGGGAAGGAAAAAAGCCCCTTCTTACAGGAGATGTAATTTTATATCTTAAAGATGGGATTGGTATGGTGAGTGAAATTTCATATACAGATAATTCAAGCTGGACAAGGAGCCGTAGGTTCAGGCTTGGGGCAAGAGTTGTGGACAACTTTGATGGTGTTAGAATAAGAGAAGCAAAGACAGAATCATTCATTGTCAGGGATCACAGAGGAGAATTGTACAAGAAGCACCATCCTCCTGGTCTGTCTGATGAAGTTTGGAGATTGGAAAAAATAGGCAAGGATGGAGCTTTCCACAAGCGCTTGAGTCGGGAAAAGATCGTTACTGTTAGAGAGTTTCTCACACTTCTGAATCTGGATCCAGCAAAGCTGCGCAGTATACTGGGCACTGGGATGTCTGCAAAGATGTGGGAAGTAACTGTGGAGCATGCTCGAACTTGTGTACTTGATACAACGAGGCACGTGTACTTCCCTTCTAATTCTCAAGAACCTGGTGTGGTCTTCAATGCTGTGGGACAAGTGACAGGACTGCTTTCTGAATGCGATTATGTCACAGTAGATAAGCTGACTGAAACTGAAAAGGCTGATGCTCAAAACGCAGTTACTGCTGCATTAAGACAAGGGGAGAAATACGCAACTTTCGAAGATGAAGACTCTCTCATGGATGGGTCTTCACACTTAACTAATGTACTTTACTCCCCAAGCTCTCCCAAGACTGAGGGATCAAGTGCCAACAAGATTTTGGCTCCCCAAAAGACTGGAGGATTCAATTACCCGCCAGCAAATGCCTCTTCCCCAGATATCATGTCATCCATTTATTCTGTTGGTGGAACTAGTAGCTTGGATGACTATTGCTTGCCTAATTTTGACAGCATGGGCCTTAGATATGATCAGACCCTCAGTTTTCCAGTCCAAGTTTCCAACTCTTTGATCTGTGACACTGATTCAATGGCTCATGCTTTTAGTGATGAAGACCATCTGCAGTTTTTTGATACTGATCTTCAATCGCATGTTCAAGCAGATCTACAGAGTGCTATTGATAGCTTCATGTTGGCACGTCCCACAGCCAATGGTGGTGCACAAAGGAGATGGAGAAAGGTATGCAATGTCCTAAAATGGTTCATGGTTAGGAAACGAGGAAACCAAATACAGGTAAGGTTGTGA 1731 0.4419 MLLDFYFQQHRSVVELLLSFFLRLFVPSSAMSLKRRPDDGKTPDDKRRKPPPFSSVVRDVMKLQSLGHLLEPILEPLVRKVVKEEVEAALKRHLTSMKQTCGKEFHTTELRNLQLQFENSICLPVFTGARIEGEDGSNLRIGLVDALTGKVVSTGPESSAKVEIVVLEGDFEEESETWMPEEFKSNIVREREGKKPLLTGDVILYLKDGIGMVSEISYTDNSSWTRSRRFRLGARVVDNFDGVRIREAKTESFIVRDHRGELYKKHHPPGLSDEVWRLEKIGKDGAFHKRLSREKIVTVREFLTLLNLDPAKLRSILGTGMSAKMWEVTVEHARTCVLDTTRHVYFPSNSQEPGVVFNAVGQVTGLLSECDYVTVDKLTETEKADAQNAVTAALRQGEKYATFEDEDSLMDGSSHLTNVLYSPSSPKTEGSSANKILAPQKTGGFNYPPANASSPDIMSSIYSVGGTSSLDDYCLPNFDSMGLRYDQTLSFPVQVSNSLICDTDSMAHAFSDEDHLQFFDTDLQSHVQADLQSAIDSFMLARPTANGGAQRRWRKVCNVLKWFMVRKRGNQIQVRL 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00870 576 Pfam Calmodulin binding protein central domain 271 336 IPR046830 -
Gma17g00870 576 PANTHER CALMODULIN-BINDING PROTEIN 60 A 36 569 - -
Gma17g00870 576 MobiDBLite consensus disorder prediction 33 53 - -
Gma17g00870 576 PANTHER OS02G0177800 PROTEIN 36 569 IPR012416 GO:0005516
Gma17g00870 576 Pfam Calmodulin binding protein-like N-terminal domain 113 258 IPR046831 -
Gma17g00870 576 MobiDBLite consensus disorder prediction 34 53 - -
Gma17g00870 576 Pfam Calmodulin binding protein C-terminal domain 343 400 IPR046829 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00870 Gma-Chr17 7383688 7388679 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00870 31 384 Calmodulin-binding Proteins AT5G62570 60.665 1.71e-155 448
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00870 - - gmx:100793156 1105.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00870 17 7383688 7388679 Gma17g00870 17 7383688 7388679 ECH