Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00865 ATGCAGCCAGGTGGTCGATCTCCTAAGCCAGTGAGTAGTCCAACATCAACATCACAGCTAAAATCTGGTTCAGATAGTGTCCAGAACAGTGTTTCTTCCTTTTCTTCTCATGTTAAGGGTAGGAAAAGGGAGAGAGTAGATAAAGGGCAAGAATCTGTAAAGCGAGATCGTTCAACCAAAATTGATGATGGAGATTCTGGTCATTTTAAGCAGGATAGCATTTTGAAGACAGAGATTGCCAAAGTAACAGAAAAGGGAGGCCTTATTGATACTGAAGGGGTTGAGAAATTAGTGCAGCTGATGGTTCCAGATGGAAATGAGAAAAAGATTGATTTAGCTAGCCGGTCAATGCTTGCAGCTGTAATTGCAGCAACAGATAAATTTGATTGCCTTAGTCGGTTTGTGCAACTAAAGGGTTTGCCTATATTTGATGAATGGCTCCAAGAGGCTCATAAAGGGAAGATTGGTGATGGTCTTGGGTCTAGAGATGGTGATAAATCTGTTGATGACTTTCTTTTTGTATTACTCCGAGCGCTAGATAAGCTTCCAGTAAACCTTCAGGCTCTACAAGCTTGTAACATTGGTAAATCTGTGAATCATTTGCGAACTCATAAAAACTTGGAAATTCAGAAGAAAGCAAGGGGCTTAGTTGACACATGGAAAAAACGTGTTGAAGCTGAAATGATTATAAATGATGCTAGGTCTGGTTCAGTTCAGACTGTCCCCTGGCCAGCCAGACAACGGCTTTCTGAAGTTGCTCAAGGTGGGAATAAACATTCGAGTGGGTCAGCTGATGTTGCCATGAAGAGCTCAGTTACACAGCTTTCTGCATCCAAAACTGCCTCTGCAAAGATTGTCCCAGGAGAGAATACAAGATCTACATCTGCATCTCCAGGGTCTACGAAATCAGTGCCTTCACCTGCACCCGCAACTGCAAACTTGAAAGATGGACAGCCCTGTGTTGCCACTGCTAGTGGTTCCTTTGATCTTCCTGTGGCAAATGCAAGGGATGAGAAAAGTAGCAGTTCTAGTCCATCTCACAACAGTCAATCTTATTCCAGTGATCATGTGAAAGCTGGGGGTCTCTCAGGAAAGGAGGATGCCAGGAGCTCTACTGCAATGAGTGTGAATAAGGTATCGGGAGGCTCTTCACGGCACCGAAAATCTATGAAGGGATTTCCGGGTTCAACTCCATCTAGAAGGCAAAGGGAAACTGGGTCGAGGCAGAATTCCTCACACAAAAATTTAATTTCTGAGAAAATATCTCAATCTGGATTAAGGGAAAAAGCAAATGATGGAACTACTCTTGAGGGGCATACTCCGAAGCTGATTGTTAAGATCCAAAACCGAAGTCGAAGTCCTGCACAAAGTGCCACTGCAGGTTCTTCTGATGATCCTGCAATCATGAACAGTCGAGCTTCATCTCCTGTTCTTTCAGAGAAGCACGATCAGTTTGACCGCTGCTCAAAGGAAAAGAGTGATTTTTATCGAGCTAATATTGGTGCAGACATTTATACAGAATCGTGGCAGAGTAACGATTTCAAAGATGTATTGACTGGTTCTGATGAGGGTGATGGATCACCAGAAGCCATTACTGATGAACAGTGTAGGACTGGTGAGGATTGTAAGAAAGTATTAGATGTATCAAAGGCAGCTTCATCATCATCTGGGAATGAAAGTAGAGCCAGGAATTTGCAGGATGCTTCTTACAGCTCCATCAATGCTCTTATTGAAGGTGTTAAGTACACTGAAGCTGATGATGTTGGAATGAATCTTCTTGCTAATGTGGCTGCTGGAGAGATCTCAAAATCTGAATTGGGAATGCCAGTTGGATCCCCTGAAAAAGACACCACTACTATTGAACAGTCATATGCAGGTGATGCTGCAGTAGTCAAGTCCTCTGAAGAGTATCTTGTTCAGGATAAGTGCTACACTAATGTTGAACATTCGAAGCAGGATTCTAGACCTGGTGATTTAGGGGCAGATGATGATATTCTTGCATCTGAAGGGAAAGCTACAGGAGAACACAATACATCTAGTATGGATTTATGGGTTACTGAAACTAGTTTAGAAAGCAAAGGAAAATTAATTGAAAAATCATCTGGTACATCATCTGCTGGCATTCCTGAAAGCACCATTCAAGAAGTCCGAGATAGTGACTCTAGCAAACTGGTAAAGGAAAAGAAGGTTGTTGTGAGAGTGGATGCAGTTGGTAATGTTGATGTTAAGGTCAATGTTGTTGCAAGCGAAAGTGAAACAGAGGCAATTGAAAATTTTTCGTGCACCTGTGAAGTAGTTGATGTCAAGTGTGATAACCGTGCTTCTGAAGGACTAAGCGGTGACAAAGAGACAGCTGGCAAGTCTCCTGCCATTCGCATGTCGTCTGACTATGTAATAGCAACAGATGAGAATGCACCCCAATCATCTGGTGACATTGTTGATAAGGTTCTTGAACACGTAAATGAAAGGGAATCTGAAAAAAATGATGATATGGTTGCTCAGGATCATGCTAAGGAGTCCATAAAGCAAAAAAATGAGTCTGAAAATGATGCTATTATGGTGCCCAAGAACAGAGGTTTATGTTCAGGTGCGACTGGTCTTGATGCTGAATACGTGGAAGAGAATTCAGGTACAAAAGAGGTTTGTGACCAAGTTGCAGGAGCAGGACAGATAGTGCACACAGATTTACCTAGCTTTCCTTCACGAGAAATGGATCAGTGTTCAGGTCATAAGGATTCAAAATTGACTGCCATGGAATCAGAGGAAGCAGAGGAATGCACCTCTACCACTGGAGATACCTCTTCTGCGTCTGTTGCTGGTGTCTCAGAAGTGGACACAAAAGTTGAATTTGATTTAAATGAAGGGTTCAATGCAGATGATGGGAAATGTAGTGAGATGCCTGGGTCTACACCTGCTGCAAGATTGGTCAGTCCTGTTCCATTTTCTGCTTCATCCATGTCTTTTGGTATTCTCTCGATCACAGTAGCTGCTGCTGCAAAGAGCCCCTTTGTGGCACCTGAAGATTTATTGAAAAGTAAAAAGGAGCTTGGTTGGAAGGGATCTGCTGCTACTAGTGCATTTCGGCCAGCTGAGCCCAGGAAAGTTATGGAAATTCCTCTTGATATGTCAACTACCCCTATTCCTAATGATGAAGCTAGAAAGCAGAGCCGGGCACCATTGGATTTTGACTTGAATGTTTCTGATGAAGTAATACTTGATGATGTTTCTTCCCAAAATTGTGCTCGTCAGACTGATTGTGGAACTCATTCAGACAATGGGCATGATCCAAATAAATCAATGGCCTCACATGTTAGTTGTTCTGGAGGTTTAGGTCTTGACTTGAACTTAGTGGATGGAGCTTCTGATGTGGGTAACTGCACCTTAAGTAGTAGTCATAAAATGGATGTACCACTTATGCAGGTGAAATCAGCAGCCAGTGGTCCTCCAAATGGAGAGATGAGTTTCCGCAGGGATTTCGATCTGAATGATGGACCTGTAGTTGATGAAGTCACCTCTGAACCTTTGATGTCCACACAACCCGCTAGGAATAGTGTACCATCTCAACCACCCATTTCTGGACTTAGGATGAGTAATGCAGAAGTAGGCAACTTCTCTTCATGGTTTCCTTCCACTGCGAACACCTATTCAGCGGTAACAATATCTTCAATTATGTCTGATAGAGGTGATAGGTCCTTTTCAATTGTTGCCCCTAATGGGCCACAAAGGATGTTGGGTCCTGCAACTGGTAGCAATCCATTTGGACCTGATATTTATAAGGGGGCAGTTTTGTCTTCTTCTCCTGCAGTGCCATATCAATCTGCACCATTTCAGTATCCTGTCTTCCCTTTCAATTCCAGCTTTCCTCTTCCATCAGCATCATTTTCTGGTGGATCAACTCCTTATGTAGATACAACTTCAGGAGGTAGGCTTTGCTTCCCTGCAGTAAATTCACAACTTATAGGTTCTGTTGGTAATGTTTCAGTCCATTACCCCAGGCCTTACGTTGTTAGTCTCCCAGATGGTAGCAATAGTAGCAGTGCTGAGAACTGTAGGAGAAGGACAAGGCAGGGTTTAGATCTTAATGCTGGACCTGGTTCAAACTTAGAGGGGAGAGATGATAGCTCACCTCTTGTACCACGGCAACTTTCTGTTGCTAGTTCGCAGGCCCAACTTGAAGAGCAAGCACGGATCTTTCACTTAAGCAGTGATGTTCTTAAAAGGAAGGAACCTGATGGGGGATGGGATGGCTACAAGCAAACATCATGGCAGTACCATAATTTGTAA 4284 0.4311 MQPGGRSPKPVSSPTSTSQLKSGSDSVQNSVSSFSSHVKGRKRERVDKGQESVKRDRSTKIDDGDSGHFKQDSILKTEIAKVTEKGGLIDTEGVEKLVQLMVPDGNEKKIDLASRSMLAAVIAATDKFDCLSRFVQLKGLPIFDEWLQEAHKGKIGDGLGSRDGDKSVDDFLFVLLRALDKLPVNLQALQACNIGKSVNHLRTHKNLEIQKKARGLVDTWKKRVEAEMIINDARSGSVQTVPWPARQRLSEVAQGGNKHSSGSADVAMKSSVTQLSASKTASAKIVPGENTRSTSASPGSTKSVPSPAPATANLKDGQPCVATASGSFDLPVANARDEKSSSSSPSHNSQSYSSDHVKAGGLSGKEDARSSTAMSVNKVSGGSSRHRKSMKGFPGSTPSRRQRETGSRQNSSHKNLISEKISQSGLREKANDGTTLEGHTPKLIVKIQNRSRSPAQSATAGSSDDPAIMNSRASSPVLSEKHDQFDRCSKEKSDFYRANIGADIYTESWQSNDFKDVLTGSDEGDGSPEAITDEQCRTGEDCKKVLDVSKAASSSSGNESRARNLQDASYSSINALIEGVKYTEADDVGMNLLANVAAGEISKSELGMPVGSPEKDTTTIEQSYAGDAAVVKSSEEYLVQDKCYTNVEHSKQDSRPGDLGADDDILASEGKATGEHNTSSMDLWVTETSLESKGKLIEKSSGTSSAGIPESTIQEVRDSDSSKLVKEKKVVVRVDAVGNVDVKVNVVASESETEAIENFSCTCEVVDVKCDNRASEGLSGDKETAGKSPAIRMSSDYVIATDENAPQSSGDIVDKVLEHVNERESEKNDDMVAQDHAKESIKQKNESENDAIMVPKNRGLCSGATGLDAEYVEENSGTKEVCDQVAGAGQIVHTDLPSFPSREMDQCSGHKDSKLTAMESEEAEECTSTTGDTSSASVAGVSEVDTKVEFDLNEGFNADDGKCSEMPGSTPAARLVSPVPFSASSMSFGILSITVAAAAKSPFVAPEDLLKSKKELGWKGSAATSAFRPAEPRKVMEIPLDMSTTPIPNDEARKQSRAPLDFDLNVSDEVILDDVSSQNCARQTDCGTHSDNGHDPNKSMASHVSCSGGLGLDLNLVDGASDVGNCTLSSSHKMDVPLMQVKSAASGPPNGEMSFRRDFDLNDGPVVDEVTSEPLMSTQPARNSVPSQPPISGLRMSNAEVGNFSSWFPSTANTYSAVTISSIMSDRGDRSFSIVAPNGPQRMLGPATGSNPFGPDIYKGAVLSSSPAVPYQSAPFQYPVFPFNSSFPLPSASFSGGSTPYVDTTSGGRLCFPAVNSQLIGSVGNVSVHYPRPYVVSLPDGSNSSSAENCRRRTRQGLDLNAGPGSNLEGRDDSSPLVPRQLSVASSQAQLEEQARIFHLSSDVLKRKEPDGGWDGYKQTSWQYHNL 1427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00865 1427 MobiDBLite consensus disorder prediction 368 383 - -
Gma17g00865 1427 MobiDBLite consensus disorder prediction 1 67 - -
Gma17g00865 1427 MobiDBLite consensus disorder prediction 250 483 - -
Gma17g00865 1427 CDD TFIIS_I 149 225 - -
Gma17g00865 1427 MobiDBLite consensus disorder prediction 1085 1105 - -
Gma17g00865 1427 Pfam TFIIS helical bundle-like domain 175 224 IPR017923 -
Gma17g00865 1427 ProSiteProfiles TFIIS N-terminal domain profile. 150 227 IPR017923 -
Gma17g00865 1427 MobiDBLite consensus disorder prediction 253 308 - -
Gma17g00865 1427 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 94 228 IPR035441 -
Gma17g00865 1427 PANTHER BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED 1 1423 - -
Gma17g00865 1427 PANTHER BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED 1 1423 - -
Gma17g00865 1427 MobiDBLite consensus disorder prediction 446 478 - -
Gma17g00865 1427 MobiDBLite consensus disorder prediction 922 940 - -
Gma17g00865 1427 MobiDBLite consensus disorder prediction 1338 1377 - -
Gma17g00865 1427 SMART TFS2_5 147 226 IPR003617 GO:0005634
Gma17g00865 1427 MobiDBLite consensus disorder prediction 1 36 - -
Gma17g00865 1427 MobiDBLite consensus disorder prediction 37 67 - -
Gma17g00865 1427 MobiDBLite consensus disorder prediction 395 430 - -
Gma17g00865 1427 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 129 232 IPR035441 -
Gma17g00865 1427 MobiDBLite consensus disorder prediction 897 940 - -
Gma17g00865 1427 MobiDBLite consensus disorder prediction 336 357 - -
Gma17g00865 1427 MobiDBLite consensus disorder prediction 905 921 - -
Gma17g00865 1427 MobiDBLite consensus disorder prediction 697 720 - -
Gma17g00865 1427 MobiDBLite consensus disorder prediction 697 715 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00865 Gma-Chr17 7329490 7335694 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Gma17g00865 Med26 3.1e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00865 - - gmx:100806155 2412.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00333 05 3108841 3114757 Gma17g00865 17 7329490 7335694 ECH
Gma17g00865 17 7329490 7335694 Gma17g00865 17 7329490 7335694 ECH