Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00862 ATGTCAAGAGGAATGAACCACTTCGTCTTTGTTGTCTACTCCAACGCCCTTGCAACTCTCATTCTCCTCTCTTCCTCTTTTTTCATCAACAGGAAAAATTGTAAGAATTTTGTTCATTGGAGCATTTGCAGCATAACTGTCATGCAGAATTGTGTTTTCACTGGCATTGACTACAGCTCTCCCACTCTTGGATCTGCTATGAGCAATTTGACTCCAGCAATCACTTTTGTGCTAGCGAAGTTGAATATTGGAAGCTCAATAAGCCAGATCAAGGTCATGGGCACAGTGTTGTCCATCGCTGGAGCATTACTCGTGACCCTTTACAAGGGAAGTCCCATCATCAGCTTTCGAACTCAACCCTCTCCATCACAACCATTGCCATCTTTGTTGGCTGCAACCAGTAACTGGGTCATTGGAGGTCTCTTCTTTGCCACTGCCGCATTTTCGACTGTTGTCTTCCTTGCTTGTTTGCAGGCAGTAATTATGAAAGAATATTCATATCAATCAACCATAATAGCCTACTATTGCCTGTTTGGAACTATCCATAGTACAATACTTTCTCTAATTGTAGTCAGAGATTCAAATGCATGGAAAATAAGCCTCGACGTTGACCTCATCTGTATATTCTATTCAGCTATTGCGGGAAGTGTTGTGACATTTTCTGTAACGGCATGGTGCATAAAAAGGAAAGGACCTGTATTTGTTAGCATGTTCAAGCCTGCGGGGATTGCCATTGCTGCCTTTTCCAGTGTTGCCTTCCTTGGTGAAACACTCCATGTTGGCAGTATCATTGGCGCAGTTATAATCGCCATCGGACTTTACACAGTATTGTGGGCACAATCAAAAGAGGAAAACTTGAAAGGTCTCGAAGTTGATAGAAAACCATCCCCATCTACCCAAACAAGTCCTCTACTAGAGTCCCACCAAAGAAACATTTTAGCATAA 945 0.4254 MSRGMNHFVFVVYSNALATLILLSSSFFINRKNCKNFVHWSICSITVMQNCVFTGIDYSSPTLGSAMSNLTPAITFVLAKLNIGSSISQIKVMGTVLSIAGALLVTLYKGSPIISFRTQPSPSQPLPSLLAATSNWVIGGLFFATAAFSTVVFLACLQAVIMKEYSYQSTIIAYYCLFGTIHSTILSLIVVRDSNAWKISLDVDLICIFYSAIAGSVVTFSVTAWCIKRKGPVFVSMFKPAGIAIAAFSSVAFLGETLHVGSIIGAVIIAIGLYTVLWAQSKEENLKGLEVDRKPSPSTQTSPLLESHQRNILA 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00862 314 MobiDBLite consensus disorder prediction 294 314 - -
Gma17g00862 314 SUPERFAMILY Multidrug resistance efflux transporter EmrE 198 282 - -
Gma17g00862 314 SUPERFAMILY Multidrug resistance efflux transporter EmrE 18 109 - -
Gma17g00862 314 MobiDBLite consensus disorder prediction 289 314 - -
Gma17g00862 314 PANTHER WAT1-RELATED PROTEIN 1 305 IPR030184 GO:0016021|GO:0022857
Gma17g00862 314 Pfam EamA-like transporter family 2 106 IPR000620 GO:0016020|GO:0016021
Gma17g00862 314 Pfam EamA-like transporter family 139 277 IPR000620 GO:0016020|GO:0016021
Gma17g00862 314 PANTHER WAT1-RELATED PROTEIN 1 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00862 Gma-Chr17 7306326 7313965 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00862 3 308 Nodulin-like Gene Family AT5G40240 36.308 1.94e-56 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00862 - - ccaj:109809148 422.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00337 05 3134995 3136508 Gma17g00862 17 7306326 7313965 ECH
Gma02g00286 02 2987304 2991039 Gma17g00862 17 7306326 7313965 ECH
Gma17g00862 17 7306326 7313965 Gma17g00862 17 7306326 7313965 ECH
Gma17g00862 17 7306326 7313965 Gma05g00337 05 3134995 3136508 GST