Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00856 ATGAATTTGGTTCCTTACGAGTACATTGTCTGCAGGCAGGGGAGTCTTACAATGGATGAAGCTTTAGACATTGGTTCTGAATCACCTCTTACAAATGCACTTGTTATTTCTGAGTTTATAGCTTGCTTACCTTCTCTTAGTGGGGCAATCAGGGTAAACCCATGGGACATTAATGCTGTAGCTGATGCACTGAATTTGGCCATCACAATGCCCAGTGGAGAGAAACAGTTGCGGCATGAGAAGCACTATCGATATGTTAGCTCTCATGACGTAGCTTACTGGGCCAAAAGTTTTGTGCAAGATCTTGAGTATTCATGCAAGGATCACTATAGTAAAAATCGCTGGGGGAAAACCACGCTGAGTGAATGGTTTGATCAGTGTGAGACTCTTGGTATAGCAGCTGAGCATGGTTATTATCTAAAATGGAGTCAACAGTCAGCTTGGGAAATGAACCATATAAGTACTGGTTCTTCTTGGAAAGAGATTGTTGAACCAGTGATGAGATTGTATACTGAGGCAACAAATGGCTCCTATATAGAGACCAAAGAGAGTGCCTTGGTATGGCACTACTATGATGCTGATCCTGATTTTGGATCTTGGCAAGCCAAGCAGCTGTTGGATCACCTTGAATGCTTATTTGCAAACGAACCGGTAACTATGAAGAAAGTTTACAGTGGAACCTCTTCTCCTGCACCAGAAATCTTTGCATGCACTGTTAATAAAAAACCAAGTAAAGCTAGGTACTATTTAGAGGATACTGAGGATGTGATGATGTTACTTCAAGCTCTTGGTACCATTTCAGTGCCTAAATCAACATCTCCTGAGGAAGACTCTTCTGGAAAAACAGAAGAAGCCTGTTTTGACGTTTGA 870 0.4172 MNLVPYEYIVCRQGSLTMDEALDIGSESPLTNALVISEFIACLPSLSGAIRVNPWDINAVADALNLAITMPSGEKQLRHEKHYRYVSSHDVAYWAKSFVQDLEYSCKDHYSKNRWGKTTLSEWFDQCETLGIAAEHGYYLKWSQQSAWEMNHISTGSSWKEIVEPVMRLYTEATNGSYIETKESALVWHYYDADPDFGSWQAKQLLDHLECLFANEPVTMKKVYSGTSSPAPEIFACTVNKKPSKARYYLEDTEDVMMLLQALGTISVPKSTSPEEDSSGKTEEACFDV 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00856 289 Gene3D Glycogen Phosphorylase B; 1 87 - -
Gma17g00856 289 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 116 IPR001830 GO:0003824|GO:0005992
Gma17g00856 289 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 222 271 IPR001830 GO:0003824|GO:0005992
Gma17g00856 289 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 1 106 - -
Gma17g00856 289 Gene3D - 114 278 IPR023214 -
Gma17g00856 289 SUPERFAMILY HAD-like 119 264 IPR036412 -
Gma17g00856 289 Pfam Glycosyltransferase family 20 1 103 IPR001830 GO:0003824|GO:0005992
Gma17g00856 289 MobiDBLite consensus disorder prediction 268 289 - -
Gma17g00856 289 Pfam Trehalose-phosphatase 121 219 IPR003337 GO:0003824|GO:0005992
Gma17g00856 289 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE (UDP-FORMING)-RELATED 1 116 - -
Gma17g00856 289 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE (UDP-FORMING)-RELATED 222 271 - -
Gma17g00856 289 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE (UDP-FORMING)-RELATED 116 222 - -
Gma17g00856 289 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 116 222 IPR001830 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00856 Gma-Chr17 7269779 7271114 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00856 116 288 Trehalose Biosynthesis Gene Families AT1G23870 40.088 2.53e-47 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00856 K16055 - gmx:100808800 231.491