Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00850 ATGAAGGAAAACAGTGATGGGTTTGTGAGAGCGGATCAAATTGATCTGAAGAGCATAGATGAACAGTTGGAGAGGCACCTCAGCAAGGTGTTGACCATAGAAAAGAAAAAGCGCTCTGAAGGGGGCGAAGAAGATGCTGCTGCTCATGATCATGTTCACACCACCAGTGCCACTGCTTCTCCCAAATTCTCACATGCTTCTTCTGCTGCTAGGGTTATTAACTTCAAGAAGAAAAAGCAGGACTGGGAGATTGATCCTTCTAAACTCATCATCAAAACTGTTATAGCTCGTGGCACTTTTGGCACTGTCCATCGGGGTGTCTATGATACCCAAGATGTTGCTGTGAAATTGTTGGACTGGGGGGAAGAAGGACAAAGAACAGAAGCAGAAATTGCCTCCCTGAGGGCAGCGTTTACACAGGAAGTTGCTGTTTGGCATAAACTCGATCACCCCAATGTCACAAAGTTTATAGGGGCAACAATGGGGTCTTCAGAATTGCAGATACAAACTGATAATGGTCTAATTGGCATGCCAAGCAATGTCTGTTGCGTTGTTGTTGAGTATCTCGCTGGAGGCAATTTGAAACAATACCTAATAAAGAACAGGAGGAGGAAGTTAGCTTTAAAAGTTGTCATCCAGCTGGCACTTGATCTTGCAAGAGGGCTGAGTTATCTTCACTCTCAGAAGATTGTCCATAGAGATGTAAAGACAGAGAACATGTTGTTGGATAAGACACGTACAGTTAAAATTGCTGATTTTGGGGTTGCACGTGTTGAGGCATCAAATCCTAATGATATGACTGGGGAGACTGGTACTCTTGGTTATATGGCTCCAGAGGTTTTAAATGGCAACCCCTATAACAGGAAATGTGATGTGTACAGTTTTGGCATCTGCTTATGGGAAATATATTGTTGTGACATGCCATATCCTGACCTAAGTTTCTCAGAAATTACTTCAGCTGTCGTTCGCCAGAATTTAAGACCAGAAGTACCAAGATGTTGCCCGAGTTCCCTAGCAAATGTAATGAAGAAGTGCTGGGATGCCAGTCCCGATAAGCGGCCGGAGATGGATGAGGTAGTTTCCATGCTGGAGGCCATTGACACATCCAAAGGTGGAGGTATGATCCCTCATGATCAGCAACAGGGTTGTTTTTGCTTCCGCAAGCATAGAGGGCCTTGA 1179 0.4453 MKENSDGFVRADQIDLKSIDEQLERHLSKVLTIEKKKRSEGGEEDAAAHDHVHTTSATASPKFSHASSAARVINFKKKKQDWEIDPSKLIIKTVIARGTFGTVHRGVYDTQDVAVKLLDWGEEGQRTEAEIASLRAAFTQEVAVWHKLDHPNVTKFIGATMGSSELQIQTDNGLIGMPSNVCCVVVEYLAGGNLKQYLIKNRRRKLALKVVIQLALDLARGLSYLHSQKIVHRDVKTENMLLDKTRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEITSAVVRQNLRPEVPRCCPSSLANVMKKCWDASPDKRPEMDEVVSMLEAIDTSKGGGMIPHDQQQGCFCFRKHRGP 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00850 392 CDD STKc_MAP3K-like 95 363 - -
Gma17g00850 392 ProSiteProfiles Protein kinase domain profile. 89 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma17g00850 392 SUPERFAMILY Protein kinase-like (PK-like) 70 363 IPR011009 -
Gma17g00850 392 Gene3D Transferase(Phosphotransferase) domain 1 190 381 - -
Gma17g00850 392 PANTHER DUAL-SPECIFICITY KINASE TKL-PL-4 FAMILY-RELATED 1 386 - -
Gma17g00850 392 MobiDBLite consensus disorder prediction 34 63 - -
Gma17g00850 392 Pfam Protein tyrosine and serine/threonine kinase 91 363 IPR001245 GO:0004672|GO:0006468
Gma17g00850 392 ProSitePatterns Serine/Threonine protein kinases active-site signature. 230 242 IPR008271 GO:0004672|GO:0006468
Gma17g00850 392 MobiDBLite consensus disorder prediction 34 51 - -
Gma17g00850 392 PRINTS Tyrosine kinase catalytic domain signature 186 199 IPR001245 GO:0004672|GO:0006468
Gma17g00850 392 PRINTS Tyrosine kinase catalytic domain signature 224 242 IPR001245 GO:0004672|GO:0006468
Gma17g00850 392 PRINTS Tyrosine kinase catalytic domain signature 290 312 IPR001245 GO:0004672|GO:0006468
Gma17g00850 392 PRINTS Tyrosine kinase catalytic domain signature 334 356 IPR001245 GO:0004672|GO:0006468
Gma17g00850 392 SMART serkin_6 89 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma17g00850 392 Gene3D Phosphorylase Kinase; domain 1 77 172 - -
Gma17g00850 392 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00850 Gma-Chr17 7222831 7227909 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00850 1 324 MAP Kinase Kinase Kinase AT5G50000 78.704 0.0 530
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Gma17g00850 PK_Tyr_Ser-Thr 5.4e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00850 - - gmx:100788033 798.505
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00348 05 3226072 3233637 Gma17g00850 17 7222831 7227909 ECH
Gma17g00850 17 7222831 7227909 Gma17g00850 17 7222831 7227909 ECH
Gma17g00850 17 7222831 7227909 Gma05g00348 05 3226072 3233637 GST