Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00848 ATGCACCACCTCACCGGTCACCGCAACATCATGGAGCTCTGCGGCAGCGGTGAGCTTTTCGACCGGATCATCGCCAAGGGCCATTACCCCGAGCATGCCGCCGCCAACCTGTGCCGCCAGATTGTGACGGTGGTCCACGATTGCCACACCATGGGAGTGATGCACAGGGATCTCAAGCCAGAGAACTTCCTGTTCCTCAGCAAGGACGAGAACTCGCCGCTTAAGGACACATGCTTCGGTCTCTCCATTTTCTTCAAGCTCGGTTAG 267 0.5768 MHHLTGHRNIMELCGSGELFDRIIAKGHYPEHAAANLCRQIVTVVHDCHTMGVMHRDLKPENFLFLSKDENSPLKDTCFGLSIFFKLG 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00848 88 SUPERFAMILY Protein kinase-like (PK-like) 9 86 IPR011009 -
Gma17g00848 88 PANTHER BNAA03G46140D PROTEIN 9 88 - -
Gma17g00848 88 PANTHER SERINE/THREONINE-PROTEIN KINASE 9 88 - -
Gma17g00848 88 ProSiteProfiles Protein kinase domain profile. 1 88 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma17g00848 88 Gene3D Transferase(Phosphotransferase) domain 1 14 82 - -
Gma17g00848 88 Pfam Protein kinase domain 10 85 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma17g00848 88 ProSitePatterns Serine/Threonine protein kinases active-site signature. 53 65 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00848 Gma-Chr17 7193889 7194155 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00848 1 88 EF-hand Containing Proteins AT4G23650 69.231 5.81e-45 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Gma17g00848 Pkinase 4.2e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00848 K13412 - gmx:100808536 159.844