Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00834 ATGGAAGAAACATTTGTTCCCTTACGTGGGATCAAGAATGACCTCAAAGGAAGACTTATGTGCTACAAACAAGATTGGACTAGTGGAATCCGGGCAGGCATCAGGATCCTTGCCCCAACAACATATATATTTTTTGCTTCAGCAATTCCAGTTATCTCTTTTGGGGAGCAACTAGAGAGAAATACAGATGGAACTCTAACGGCAGTGCAGACCCTTGCATCAACCGCACTATGTGGCATTATCCATTCAGTCTTAGGAGGGCAGCCCCTCCTCATACTAGGCGTAGCCGAACCAACAGTTCTGATGTATACATTTCTGTATGACTTTGCAAAGGACAGAAAGGATTTGGGGCACAAACTATTCCTGCCTTGGACTGGATGGGTGTGTGTTTGGACTGCTGTGTTGCTCTTCTTGTTGGCCATTCTTGGGGCATGCTCCATAATCAACAGATTCACACGCCTTGCAGGAGAACTATTTGGTCTGCTAATCGCAATGCTCTTTATGCAGCAGGCTATAAGGGGACTAGTGGAAGAGTTTGGTGTGCTCCAGTCTCAGAGAGAAGGTACCAATCAGATTGCACTCCAATCCTCTTGGCTGTTTGGCAATGGAATGTTTGCTTTGGTTTTGTCATTTGGCCTTCTGTTTACTGCACTTAGAAGCCGTAAGGCTAGATCTTGGCGATATGGGGCAGGATGGTTGCGGGGATTTGTGGCTGATTATGGAGTCCCACTAATGATTCTTGTGTGGACTGCTGTGTCCTATATACCAACCAATAAGGTTCCAAGGGGAATCCCAAGGCGACTTTTCAGTCCAAATCCATGGTCTCCTGGTGCATACTCAAATTGGACTGTAATTAAGGAAATGTTGAATGTGCCTCTCATCTATATTATTGGAGCATTTATACCGGCAACTATGATTGCCGTGCTTTACTACTTTGATCATAGTGTTGCATCACAACTTGCCCAGCAGAAGGAGTTCAATCTAAGAAAACCCTCATCTTATCATTATGACCTTCTTCTCTTGGGCTTCTTGACCATACTGTGTGGACTTATTGGAATCCCTCCATCCAACGGCGTGATTCCTCAATCTCCAATGCATACTAAAAGCTTAGCTACTCTAAAACATCAGCTCTTGCGCAATAAGCTTGTATCTGCTGCACGAAAAAGCATGCAGAAAAATATGAACCTGTGTCAATTATACCGAAATATGCAAGAAGCATATGACCAAATGCAGACTCCATTAGCCCGCCAAATACCACCTGCCCTGGGGCTAAAGGAGCTGAAGGAATCCACCATCCAACTGGCTTCAAGTCATGGATACATTGATTCCCCTGTTGACGAGGCTGTTTTCGATGTAGATAAGGATGTTGATGACCTTTTGCCAGTTGAAGTTAAAGAACAGCGCCTCAGCAATCTGCTGCAGGCATTGATGGTTGCAGCTTGTGTTGCTGCTATGCCTCTCTTGAAGAAGATACCAACCTCAGTGCTTTGGGGTTACTTTGCTTTCATGGCAATTGAAAGCTTGCCCGGAAACCAGTTTTGGGAGAGAATACTATATCTTTTCACTGCTCCAAGTCGAAGATACAAAGTGATGGAGGAACACCATGCAGCCTTTATTGAGACCGTGCCATTCAAAACGGTTGCCATGTTTACCTTATTCCAGACAGCTTACTTGCTTCTCTGCTTTGGTCTAACCTGGATACCAATTGCTGGGGTCCTATTCCCATTGTTAATCATGCTTCTAATCCCAGTACGCCAATATTTCCTTCCCAAGTTTTTTAAAGGAGCCCATCTTCAAGAGTTAGATGCTGCAGCATACGAGGAAACGCCTGCTATTAGTTTCAACTTGTCATTCGATGATTCAGGAAGTCAGACAACAACAGTCAATAATAATAGTGGGGAAATTCCGGTCGAAATAATTACAAGGAGTCCTGGAGAGATCTGCCTCAATAAAAAATGA 1959 0.4421 MEETFVPLRGIKNDLKGRLMCYKQDWTSGIRAGIRILAPTTYIFFASAIPVISFGEQLERNTDGTLTAVQTLASTALCGIIHSVLGGQPLLILGVAEPTVLMYTFLYDFAKDRKDLGHKLFLPWTGWVCVWTAVLLFLLAILGACSIINRFTRLAGELFGLLIAMLFMQQAIRGLVEEFGVLQSQREGTNQIALQSSWLFGNGMFALVLSFGLLFTALRSRKARSWRYGAGWLRGFVADYGVPLMILVWTAVSYIPTNKVPRGIPRRLFSPNPWSPGAYSNWTVIKEMLNVPLIYIIGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPSSYHYDLLLLGFLTILCGLIGIPPSNGVIPQSPMHTKSLATLKHQLLRNKLVSAARKSMQKNMNLCQLYRNMQEAYDQMQTPLARQIPPALGLKELKESTIQLASSHGYIDSPVDEAVFDVDKDVDDLLPVEVKEQRLSNLLQALMVAACVAAMPLLKKIPTSVLWGYFAFMAIESLPGNQFWERILYLFTAPSRRYKVMEEHHAAFIETVPFKTVAMFTLFQTAYLLLCFGLTWIPIAGVLFPLLIMLLIPVRQYFLPKFFKGAHLQELDAAAYEETPAISFNLSFDDSGSQTTTVNNNSGEIPVEIITRSPGEICLNKK 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00834 652 PANTHER ANION EXCHANGE PROTEIN 1 647 IPR003020 GO:0005452|GO:0006820|GO:0016020
Gma17g00834 652 Gene3D Helical hairpin bin 18 60 - -
Gma17g00834 652 PANTHER BORON TRANSPORTER 2-RELATED 1 647 - -
Gma17g00834 652 Pfam HCO3- transporter family 462 552 IPR011531 GO:0006820|GO:0016021
Gma17g00834 652 Pfam HCO3- transporter family 204 375 IPR011531 GO:0006820|GO:0016021
Gma17g00834 652 Pfam HCO3- transporter family 8 181 IPR011531 GO:0006820|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00834 Gma-Chr17 7039814 7044571 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00834 1 646 Antiporters AT3G62270 77.245 0.0 1028
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00834 K24194 - gmx:100782542 1271.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00834 17 7039814 7044571 Gma17g00834 17 7039814 7044571 ECH
Gma17g00834 17 7039814 7044571 Gma05g00363 05 3411953 3417110 GST
Gma17g00834 17 7039814 7044571 Gma04g01784 04 47740651 47746554 PCT
Gma17g00834 17 7039814 7044571 Gma06g01620 06 15926904 15932810 PCT
Gma04g01784 04 47740651 47746554 Gma17g00834 17 7039814 7044571 PCT
Gma06g01620 06 15926904 15932810 Gma17g00834 17 7039814 7044571 PCT