Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00831 ATGCAGAGCACAGTTTTCTCTCTCTCCCCTTCCCTCTCTCTCCCAAAACAACCTCTCAAACGCTCTGTCTCTGTTTCCACTTCCAAACTCAACGTCATTCTCACTCCCTCTTCATTCCCATGTCAACCATGTTCTCTTGCTTATTCTCCATCTTTCAAACTCGCTCCCTCACACTTTCACCCCTTCCATGCCAGAGCAACCTCCGTGCCGGAGAGCAGCGCCGGCAACACTCTGCTCAATACTCTGGAACTTGGAGCCCTGTTTGGGCTCTGGATCCTcttcaacatctacttcaacatctacAACAAACAGGTCTTAAAGGTCTACCATTTCCCTTTAACCGTAAGCACCCTTCAGTTCGCTGTGGGGTCTCTCTTCGTAGCATTCATGTGGAGTTTCAATCTCTATAAGAGACCTAAAGTTAGTGGCGCCCAGCTTGCAGCGATATTGCCACTGGCTCTAGTACATACTTTAGGGAACCTTTTCACCAACATGAGTCTCGGACAGGTTGCTGTGTCTTTCACTCACACTATAAAAGCGATGGAGCCTTTTTTTTCAGTGCTCCTTTCTGCTATGTTCCTTGGAGAGGCGCCTACTGCATGGGTTGTTGGTTCCCTTGTGCCTATTGTTGGTGGGGTGGCGTTAGCGTCTGCTACCGAGGCCTCTTTCAATTGGGCTGGATTTTGGAGTGCAATGGCTTCCAATTTGACTAATCAATCTCGTAATGTTCTTAGCAAAAAAGTCATGGTTAACAAGGAGGAATCTATGGACAACATAACCCTCTTCTCAATAATAACGGTTATGTCATTCTTGTTATCAGTACCTGTAACTTTGTTGATGGAGGGTGTCAAATTTACCCCTGCTTACCTGCAATCTGCTGGATTAAATGTTAACGAAGTGTACATCAGATCACTTCTTGCTGCACTATGTTTCCATGCATATCAGCAAGTTTCTTATATGATACTGCAGAAGGTGTCACCTGTTACCCACTCTGTAGGAAATTGTGTGAAAAGGGTTGTGGTCATCGTGAGCTCTGTCATCTTCTTCCAAACACCAGTATCACCAATTAACGCATTGGGGACTGCTATAGCTCTTGCTGGTGTTTTCTTGTATTCCAGGGTGAAGCGACTTAAGCCAAAGACAACTTAA 1149 0.4465 MQSTVFSLSPSLSLPKQPLKRSVSVSTSKLNVILTPSSFPCQPCSLAYSPSFKLAPSHFHPFHARATSVPESSAGNTLLNTLELGALFGLWILFNIYFNIYNKQVLKVYHFPLTVSTLQFAVGSLFVAFMWSFNLYKRPKVSGAQLAAILPLALVHTLGNLFTNMSLGQVAVSFTHTIKAMEPFFSVLLSAMFLGEAPTAWVVGSLVPIVGGVALASATEASFNWAGFWSAMASNLTNQSRNVLSKKVMVNKEESMDNITLFSIITVMSFLLSVPVTLLMEGVKFTPAYLQSAGLNVNEVYIRSLLAALCFHAYQQVSYMILQKVSPVTHSVGNCVKRVVVIVSSVIFFQTPVSPINALGTAIALAGVFLYSRVKRLKPKTT 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00831 382 SUPERFAMILY Multidrug resistance efflux transporter EmrE 120 217 - -
Gma17g00831 382 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 82 380 IPR004696 GO:0016021|GO:0022857|GO:0055085
Gma17g00831 382 PANTHER PLASTID PHOSPHATE TRANSLOCATOR 21 378 - -
Gma17g00831 382 PANTHER SOLUTE CARRIER FAMILY 35 21 378 - -
Gma17g00831 382 Pfam Triose-phosphate Transporter family 83 372 IPR004853 -
Gma17g00831 382 SUPERFAMILY Multidrug resistance efflux transporter EmrE 298 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00831 Gma-Chr17 7016950 7021585 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00831 1 380 Antiporters AT5G33320 67.327 3.58e-174 489
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00831 K15283 - gmx:100780925 716.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00831 17 7016950 7021585 Gma17g00831 17 7016950 7021585 ECH
Gma17g00831 17 7016950 7021585 Gma04g01786 04 47805045 47808796 PCT
Gma17g00831 17 7016950 7021585 Gma06g01617 06 15882815 15887707 PCT
Gma04g01786 04 47805045 47808796 Gma17g00831 17 7016950 7021585 PCT
Gma06g01617 06 15882815 15887707 Gma17g00831 17 7016950 7021585 PCT