Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00821 ATGGAAGTCCCCAAATCCCCTTCCAAATACAAACGAATCGCCAAACACAAATGGCTCATAAAATTCGCTTTACTCATTCTGATGATGCTGTTATTGTTTCTGGGTTTTTATCTCGAGTCAGATACTAGGGGAAAACTCAATGCGTCGTCGTATTACACCGTGGTTGTGGATTGTGGAAGCACCGGGACACGTGTGAACGTGTATGAGTGGATGGTAGGGGTAAAGGGAATAAGCAAAGGGAACTTGCCAAGTTTGCTGCACTCTTATCCTGATAATACAACCAGGAGTAGCTCACTCTGGAAAAATTCTTGTCAATATCACTGTATGCAAACCGAACCCGGGTTACACAGCTTTGTTAATGATTCTTTAGGAGTGAGAAAGGCTCTGGAGCCTCTGATTGTGTGGGCAGAACATCTGGTGCCGCGCGAAATGCACCGGAAAACTCCTGTTTTTGTCTTGGCTACAGCCGGGTTGAGGAGGCTTCCCGGGTTGGAGGCGGAATGGGTCTTGGGAGAGGTCGAGGCTGTTGTGAAAGATCATAACTTTATGTTTAGCAAGAGCTGGATAAGGGTTTTGAGTGGGAGGGAGGAAGCCTATTATGGTTGGGTGGCTTTGAACTACAAAATGGGCAGCTTTTATAGCTATCTTGACTCTCCCACTTTGGGACTTGTTGATTTGGGTGGCTCTTCGTTGCAGGTTGTGGTTGAGACTGATGGTGCTGGGGATGATGTGCATATGATGAGATCGAAGCTCAGCTCAATGGAACATCAGATTATGGCGTTCTCATTGCCTGCATTTGGCTTAAATGAAGCGTTTGATAGGACAGTTCTTATGCTCAGAAACAATCAAAGTGAGGAAAGAACTGAGCTCAGACATCCTTGTCTGGTCTCAACTTTTCTACAAAACTATACATGCCATTCTTGCTCTGGATTGGCTTCCATTTATCAGAAAAATCGCAGCCAACACCAGGAAGGTGAACTTCATTCTTTACGTCTTACTGGAGAACCTGATTGGGAGCAATGTAAAGAACTAGCTATTGCTGCTGCTATGAACTTGAGTGATTCCAAATTGTCACAGACAGTTAGCAAAAATTGCCAAGCTAGTTCATTTTCTGGTATTGGCACTGGTATACTTAATTTAACAGCTGTTGCACACCCAATCAAGTTTCATGCTTTATCTGGCTTCTTTTTTGTCTACAATAAGCTAAAGTTAAGCCCAAGAACCAACTTAACAATGGTTTGGGAGTCAGGCAAGCAATTATGTTCAAATTTATGGTCTGGTTTGAGCAATGTTTCTGACAATCCAAAGTATGCTGGACAATTTTGCTTCCGGGTGGCTTATATGGCATCATTGATTGAATATGGTCTGTGTCTTGGTGATGTTGAAATGGTATTTGGTCCAGGTGACATTTCGTGGACCTTAGGAGCTGCATTGATTGAAGGGAAATTTCTGTGGTTAAATAGTACAAGACACAAATCCCATGTTATTATTTCAACTTTAAAGAATGTCAAGTTGGTTCTTGCCGTGAAGGAAAAGCTTGAAAAAGAACACCATAACCTCCCTGTTGGCAGAAATGGAAGAGATGATGAAGATATGATACTGTGGTTTCTCAAAGATCGCAAGTTTTCTATTGATGATGCTATTTACAAGTTGACTAAAGCCATTAAATGGCGTCGAGATTTTGAGGTGTCTAAATTAACTGAAGAAGTCGTTAAAGATGCTCTTCAAACTGGAAAAGGATACGTACACGACCTTTTAGATATCAATGGCCGACCTGTGGTCGTGGTGGTTGGATCAAAGCATATTCCTCAAGCACTGGACCCTGCAGACGATGAGAGACTCTGTGTTTTCTTAATTGAGAAGGCATTGAGTAAGCTTCCAACTGGAAAAGAACAAATACTTACAATAGTTGATCTCAGAGGTTTCAGTACCGAAAATGCTGATCTTAAATTCTTGACATTCTTGTTTGATGTATTCTATTATTACTATCCCAAACGATTGGCTCAAGTCCTATTTGTAGATGCACCTTTTGTTTTTAAGCCAATTTGGCAGCTAGTCAAGCCCTTGTTAAAATCATATGCTTCTCTGGTGAGATTTTGCTCTGCAGAGACTGTTAGGAAGGAATATTTTACAGATAAAACTTTGCCACCAAGCTTCAGAGATTGA 2166 0.416 MEVPKSPSKYKRIAKHKWLIKFALLILMMLLLFLGFYLESDTRGKLNASSYYTVVVDCGSTGTRVNVYEWMVGVKGISKGNLPSLLHSYPDNTTRSSSLWKNSCQYHCMQTEPGLHSFVNDSLGVRKALEPLIVWAEHLVPREMHRKTPVFVLATAGLRRLPGLEAEWVLGEVEAVVKDHNFMFSKSWIRVLSGREEAYYGWVALNYKMGSFYSYLDSPTLGLVDLGGSSLQVVVETDGAGDDVHMMRSKLSSMEHQIMAFSLPAFGLNEAFDRTVLMLRNNQSEERTELRHPCLVSTFLQNYTCHSCSGLASIYQKNRSQHQEGELHSLRLTGEPDWEQCKELAIAAAMNLSDSKLSQTVSKNCQASSFSGIGTGILNLTAVAHPIKFHALSGFFFVYNKLKLSPRTNLTMVWESGKQLCSNLWSGLSNVSDNPKYAGQFCFRVAYMASLIEYGLCLGDVEMVFGPGDISWTLGAALIEGKFLWLNSTRHKSHVIISTLKNVKLVLAVKEKLEKEHHNLPVGRNGRDDEDMILWFLKDRKFSIDDAIYKLTKAIKWRRDFEVSKLTEEVVKDALQTGKGYVHDLLDINGRPVVVVVGSKHIPQALDPADDERLCVFLIEKALSKLPTGKEQILTIVDLRGFSTENADLKFLTFLFDVFYYYYPKRLAQVLFVDAPFVFKPIWQLVKPLLKSYASLVRFCSAETVRKEYFTDKTLPPSFRD 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00821 721 SUPERFAMILY CRAL/TRIO N-terminal domain 504 569 IPR036273 -
Gma17g00821 721 Gene3D Exopolyphosphatase. Domain 2 194 464 - -
Gma17g00821 721 Gene3D - 486 719 IPR036865 -
Gma17g00821 721 PANTHER GDA1/CD39 NUCLEOSIDE PHOSPHATASE FAMILY PROTEIN 4 507 - -
Gma17g00821 721 SMART sec14_4 574 719 IPR001251 -
Gma17g00821 721 Pfam GDA1/CD39 (nucleoside phosphatase) family 47 480 IPR000407 GO:0016787
Gma17g00821 721 CDD SEC14 572 692 IPR001251 -
Gma17g00821 721 SUPERFAMILY CRAL/TRIO domain 569 709 IPR036865 -
Gma17g00821 721 Gene3D - 40 193 - -
Gma17g00821 721 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 4 507 IPR000407 GO:0016787
Gma17g00821 721 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 568 721 IPR001251 -
Gma17g00821 721 Pfam CRAL/TRIO domain 576 710 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00821 Gma-Chr17 6909017 6916572 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00821 23 484 Nodulin-like Gene Family AT4G19180 35.833 1.02e-85 284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00821 - - gmx:100775757 1003.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00821 17 6909017 6916572 Gma17g00821 17 6909017 6916572 ECH
Gma17g00821 17 6909017 6916572 Gma05g00376 05 3515516 3518775 GST