Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00818 ATGCCTGTAAATCCATGGACCCTCTTCTTCTTATGCATTTCCCTTCTTCTACTTCCATTCCATTCTTTCATAGCTGCTGCAGTGAACCAACAAGGGGAAGGTCTTCTGTCATGGAAGAGAACCCTGAATGGATCCTTGGAGGTATTGAGTAACTGGGACCCAGTTCAAGACACCCCATGTAGCTGGTATGGAGTGAGTTGCAACTTCAAGAAGGAAGTAGTACAATTGGATCTGAGGTATGTGGATTTGCTTGGAAGACTTCCCACTAATTTCACCTCATTGCTTTCCTTAACCAGTTTGATCTTAACCGGAACCAACCTCACTGGTTCAATCCCGAAAGAAATAGGTGAACTTGTGGAACTCAGCTACTTGGACTTGAGTGACAATGCCTTGAGTGGTGAAATCCCAAGTGAGCTATGTTACTTGCCCAAACTCGAGGAACTCCATCTAAACTCCAACGACCTCGTGGGGTCCATTCCAGTTGCAATTGGGAACCTCATGAAGTTGCAGAAGCTGATCCTCTACGACAATCAACTAGGCGGCGAAGTTCCCGGCACCGTCGGGAACCTTAAGAGCCTTCAAGTGTTAAGAGCAGGTGGAAACAAGAACCTGGAAGGTCCTTTACCACAAGAAATTGGCAACTGTTCAAGTTTGGTCATGTTGGGTCTTGCTGAAACAAGCCTCTCGGGTTCTCTCCCACCAAGTCTTGGCTTTTTGAAGAACCTTGAAACCATTGCCATTTACACTTCCCTACTCTCAGGTGAAATACCACCTGAACTTGGGGACTGCACAGAGCTCCAAAACATTTATCTTTACGAGAACTCCCTCACTGGATCCATACCAAGCAAGTTGGGAAACCTTAAGAAACTCGAAAACCTTCTCCTGTGGCAGAACAACCTAGTTGGAACAATCCCTCCTGAGATTGGAAACTGCGACATGTTGTCAGTGATTGACGTGTCAATGAACTCACTAACAGGAAGCATCCCCAAAACTTTCGGGAACTTGACATCACTGCAAGAGCTTCAACTCAGTGTGAACCAGATTTCAGGTGAGATTCCAGGAGAATTGGGGAAGTGTCAGCAACTCACGCATGTGGAACTTGACAACAATCTCATCACGGGTACTATACCTTCCGAATTGGGAAACCTTGCGAATCTAACTCTGTTGTTCCTTTGGCACAACAAGCTGCAAGGTAACATTCCCTCTTCACTTCCCAATTGTCAAAACCTAGAGGCTATTGATCTGTCGCAGAATGGATTGACGGGTCCCATACCCAAGGGGATATTCCAGCTCAAGAATCTCAACAAGCTCTTGCTCCTCTCCAACAATCTCTCGGGGAAAATCCCTTCTGAGATTGGTAATTGTTCCTCTCTTATTCGGTTCCGAGCCAACGACAACAACAtcaccgggaacattccctcgcagattgggaatctcaataatttgaatttcctagacctaggGAACAATCGGATTTCTGGAGTTCTCCCGGAGGAGATCTCCGGCTGCCGGAATCTAGCTTTTCTGGACGTACATTCCAACTTCATCGCCGGAAATTTGCCGGAGAGTCTGAGCCGGCTTAATTCGCTTCAGTTTCTCGATGTGTCTGATAACATGATCGAAGGTACACTAAACCCTACACTCGGCGAACTCGCGGCACTCTCGAAGCTCGTTCTGGCGAAGAATCGAATCTCCGGCTCAATTCCGAGTCAACTCGGTTCTTGTTCGAAGCTACAATTGCTGGATCTCAGCAGCAACAATATCTCCGGCGAAATCCCTGGCAGCATCGGCAACATTCCGGCGCTGGAAATCGCTCTGAATCTGAGCCTGAACCAGCTCTCCAGCGAGATCCCTCAGGAGTTTTCCGGCTTGACGAAGCTCGGCATATTGGACATATCTCACAACGTCCTCAGGGGAAAcctgcaatatctcgtgggcctgcaaaatctcgtggTGCTGAACATATCATACAACAAATTCTCGGGACGCGTCCCGGACACGCCGTTCTTCGCGAAGCTCCCGCTGAGCGTGCTGGCGGGGAACCCGGCGCTGTGCTTCTCCGGCAACGAGTGCAGCGGAGACGGAGGCGGCGGCGGGAGGTCAGGCCGGCGGGCGAGGGTGGCGCGCGTGGCCATGGTGGTGCTTCTGTGCACCGCGTGCGTGCTGCTGATGGCGGCGCTATACGTTGTGGTCGCAGCGAAACGAAGAGGGGACCGCGAAAGCGACGTGGAGGTGGTGGATGGAAAGGACAGTGACGTGGACATGGCCCCACCTTGGCAAGTGACGCTTTACCAGAAACTCGATCTGTCTATCTCTGACGTAGCGAAATGTCTCTCTGCTGGCAACGTCATTGGCCACGGCCGATCCGGCGTCGTTTACAGGGTCGACTTGCCCGCCGCCACGGGACTGGCCATTGCGGTCAAGAAGTTCCGGTTGTCGGAGAAATTCTCTGCGGCGGCGTTCTCGTCGGAAATCGCCACGCTGGCGCGTATCCGTCACCGGAACATCGTGCGCCTGCTGGGCTGGGGGGCCAACAGAAGAACCAAGTTACTGTTTTACGATTACTTACAGAACGGTAACTTGGACACTCTCTTACACGAGGGGTGCACAGGATTAATTGATTGGGAGACGCGGCTCAGGATAGCGCTGGGCGTGGCTGAGGGTGTGGCTTACTTGCACCACGATTGCGTGCCTGCTATCTTGCACCGGGACGTCAAGGCGCAGAACATTCTGTTGGGTGACAGATATGAACCCTGTTTGGCTGATTTTGGTTTCGCTCGCTTCGTCCAAGAGGATCACGCTTCCTTTTCCGTTAATCCACAGTTCGCTGGCTCCTACGGCTACATTGCTCCCGagtatgcttgcatgcttaagatcacagagaagagcgacgtgtacagctttggagtggtcctactggagataataacggggaaAAGGCCAGTGGATCCATCATTCCCGGATGGACAACAACATGTTATTCAGTGGGTGAGGGAGCACCTCAAGAGCAAGAAGGACCCAATCGAGGTTCTTGATTCCAAGCTACAAGGCCATCCAGACACACAAATACAAGAGATGTTACAAGCACTTGGTATTGCTCTCTTGTGCACAAGTAATCGTGCAGAGGATCGACCCACAATGAAAGATGTTGCTGCATTATTGAGAGAAATTCGTCACGACCCTCCTCCACCAGGTGCTGATCCCCACAAGCCCAAGCCCAAGTCCAACACAACCGAGGCTTCGTCCTATTCCTCGTCCTCAGTCACCCCTGCTCAGTTGCTGCTCCTACAATCTAGTTCAAATTCCTCATCACTTGCTTATTCCTCTTCCTCAGCAGCTGGCTACCACCCTCCAAGGAACCAATCCTGA 3369 0.4844 MPVNPWTLFFLCISLLLLPFHSFIAAAVNQQGEGLLSWKRTLNGSLEVLSNWDPVQDTPCSWYGVSCNFKKEVVQLDLRYVDLLGRLPTNFTSLLSLTSLILTGTNLTGSIPKEIGELVELSYLDLSDNALSGEIPSELCYLPKLEELHLNSNDLVGSIPVAIGNLMKLQKLILYDNQLGGEVPGTVGNLKSLQVLRAGGNKNLEGPLPQEIGNCSSLVMLGLAETSLSGSLPPSLGFLKNLETIAIYTSLLSGEIPPELGDCTELQNIYLYENSLTGSIPSKLGNLKKLENLLLWQNNLVGTIPPEIGNCDMLSVIDVSMNSLTGSIPKTFGNLTSLQELQLSVNQISGEIPGELGKCQQLTHVELDNNLITGTIPSELGNLANLTLLFLWHNKLQGNIPSSLPNCQNLEAIDLSQNGLTGPIPKGIFQLKNLNKLLLLSNNLSGKIPSEIGNCSSLIRFRANDNNITGNIPSQIGNLNNLNFLDLGNNRISGVLPEEISGCRNLAFLDVHSNFIAGNLPESLSRLNSLQFLDVSDNMIEGTLNPTLGELAALSKLVLAKNRISGSIPSQLGSCSKLQLLDLSSNNISGEIPGSIGNIPALEIALNLSLNQLSSEIPQEFSGLTKLGILDISHNVLRGNLQYLVGLQNLVVLNISYNKFSGRVPDTPFFAKLPLSVLAGNPALCFSGNECSGDGGGGGRSGRRARVARVAMVVLLCTACVLLMAALYVVVAAKRRGDRESDVEVVDGKDSDVDMAPPWQVTLYQKLDLSISDVAKCLSAGNVIGHGRSGVVYRVDLPAATGLAIAVKKFRLSEKFSAAAFSSEIATLARIRHRNIVRLLGWGANRRTKLLFYDYLQNGNLDTLLHEGCTGLIDWETRLRIALGVAEGVAYLHHDCVPAILHRDVKAQNILLGDRYEPCLADFGFARFVQEDHASFSVNPQFAGSYGYIAPEYACMLKITEKSDVYSFGVVLLEIITGKRPVDPSFPDGQQHVIQWVREHLKSKKDPIEVLDSKLQGHPDTQIQEMLQALGIALLCTSNRAEDRPTMKDVAALLREIRHDPPPPGADPHKPKPKSNTTEASSYSSSSVTPAQLLLLQSSSNSSSLAYSSSSAAGYHPPRNQS 1122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00818 1122 Gene3D Ribonuclease Inhibitor 28 186 IPR032675 -
Gma17g00818 1122 SMART LRR_typ_2 479 502 IPR003591 -
Gma17g00818 1122 SMART LRR_typ_2 287 311 IPR003591 -
Gma17g00818 1122 SMART LRR_typ_2 431 455 IPR003591 -
Gma17g00818 1122 SMART LRR_typ_2 142 166 IPR003591 -
Gma17g00818 1122 SMART LRR_typ_2 551 575 IPR003591 -
Gma17g00818 1122 SMART LRR_typ_2 335 359 IPR003591 -
Gma17g00818 1122 SMART LRR_typ_2 383 407 IPR003591 -
Gma17g00818 1122 SMART LRR_typ_2 118 140 IPR003591 -
Gma17g00818 1122 SUPERFAMILY L domain-like 29 301 - -
Gma17g00818 1122 Pfam Protein kinase domain 781 1050 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma17g00818 1122 MobiDBLite consensus disorder prediction 1075 1122 - -
Gma17g00818 1122 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 4 1075 - -
Gma17g00818 1122 Gene3D Phosphorylase Kinase; domain 1 757 855 - -
Gma17g00818 1122 PANTHER OS01G0170300 PROTEIN 4 1075 - -
Gma17g00818 1122 ProSiteProfiles Protein kinase domain profile. 778 1054 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma17g00818 1122 Pfam Leucine rich repeat N-terminal domain 29 68 IPR013210 -
Gma17g00818 1122 Gene3D Transferase(Phosphotransferase) domain 1 856 1062 - -
Gma17g00818 1122 SMART LRR_sd22_2 575 601 - -
Gma17g00818 1122 SMART LRR_sd22_2 263 295 - -
Gma17g00818 1122 SMART LRR_sd22_2 479 502 - -
Gma17g00818 1122 SMART LRR_sd22_2 624 649 - -
Gma17g00818 1122 SMART LRR_sd22_2 527 553 - -
Gma17g00818 1122 SMART LRR_sd22_2 383 412 - -
Gma17g00818 1122 SMART LRR_sd22_2 118 150 - -
Gma17g00818 1122 SUPERFAMILY Protein kinase-like (PK-like) 765 1056 IPR011009 -
Gma17g00818 1122 ProSitePatterns Serine/Threonine protein kinases active-site signature. 900 912 IPR008271 GO:0004672|GO:0006468
Gma17g00818 1122 SUPERFAMILY RNI-like 268 641 - -
Gma17g00818 1122 Pfam Leucine Rich repeat 574 591 IPR001611 GO:0005515
Gma17g00818 1122 SMART serkin_6 778 1054 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma17g00818 1122 MobiDBLite consensus disorder prediction 1057 1122 - -
Gma17g00818 1122 Gene3D Ribonuclease Inhibitor 436 692 IPR032675 -
Gma17g00818 1122 Gene3D Ribonuclease Inhibitor 200 435 IPR032675 -
Gma17g00818 1122 Pfam Leucine rich repeat 314 372 IPR001611 GO:0005515
Gma17g00818 1122 ProSitePatterns Protein kinases ATP-binding region signature. 784 809 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00818 Gma-Chr17 6877645 6882237 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00818 27 1059 Receptor kinase-like Gene Family AT5G56040 55.662 0.0 1112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Gma17g00818 Pkinase 8e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00818 - - gmx:100778064 2046.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00818 17 6877645 6882237 Gma17g00818 17 6877645 6882237 ECH
Gma17g00818 17 6877645 6882237 Gma05g00381 05 3552496 3556561 GST