Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00802 ATGGAAGATGTGAATCGCACCCCAAGAGAAGCAAAAGATTACTATTCTAGATCAATATGGTTGTCAGAAACGGCACAGGCATTTGGGAATCTCAAGAGAAGTGACAGAGATAATGTTAATGGCAGAGATTCCTACGGCTATAACTTCCAAGAAATTGTGACTCCTGAAGTTTCTGGAGCATTTGATGAAATCAAAGGTTTATTCAGAGTTAATGATGAGGTTATTGGCGAAGAAGAAAACGGTGACTATGGCCACTATTCTAGACAATCGTTGACAACAGAAATTGTGGAGATAGTTGAAGATGGCAAGAGCATAAGCAACAAAGATAGAAGAGTTGACGATCTTTATGTGGCTGTAGGCAAAGATGACTTGAATGTAGTGAAATGGGCTCTTGATCATGCTGTTTCTCCCGGTTCCCGGATTTTTCTTATCCATGTCTCTTCTCCAATCACCTTGATTCCTACGCCAGTTGGAAAGTTTGAAAGAAGTCAACTAACCCCGCAACAAGTGAGACTATACGTGAATGAGGTGAACAACAAGAGGAAGGATCTTTTGCAAAAGTACATTCAGATGAGTAATGAAGCCAAGGTAACTGCAGAAACGTTGCTCCTGGAAAGCAATGACAAAGGAAAAGCAATTCTGGACCTCATCTCTATTCTTACCATAACCAACATTGTCATCGGAATAAAAAAACTACCATTCACACGGCGCAATAACAAATTGAGCAAAGGAGAGTTCATAAAGAAACATGCACCGAGCTCCTGTGAAGTTACCTTGGTTTATAACGGCCAGGTGTTAGTGTCCGACCCTTACATGAATGGCTTGGTATCCAACGGCATAACATCACAAAATAAAAGTCACTTGAAAAACAACTTCTTTCAGTGCATGTGCTTTTCAGGGTGCGTGAGAGAAGACAATGGTAGTAGCTAG 930 0.4086 MEDVNRTPREAKDYYSRSIWLSETAQAFGNLKRSDRDNVNGRDSYGYNFQEIVTPEVSGAFDEIKGLFRVNDEVIGEEENGDYGHYSRQSLTTEIVEIVEDGKSISNKDRRVDDLYVAVGKDDLNVVKWALDHAVSPGSRIFLIHVSSPITLIPTPVGKFERSQLTPQQVRLYVNEVNNKRKDLLQKYIQMSNEAKVTAETLLLESNDKGKAILDLISILTITNIVIGIKKLPFTRRNNKLSKGEFIKKHAPSSCEVTLVYNGQVLVSDPYMNGLVSNGITSQNKSHLKNNFFQCMCFSGCVREDNGSS 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00802 309 CDD STK_N 116 263 - -
Gma17g00802 309 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 122 252 - -
Gma17g00802 309 Coils Coil 174 194 - -
Gma17g00802 309 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 74 304 - -
Gma17g00802 309 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 74 304 - -
Gma17g00802 309 Gene3D HUPs 117 259 IPR014729 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00802 Gma-Chr17 6714525 6717345 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00802 113 268 U-box Gene Family AT3G61390 30.247 7.86e-14 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00802 - - gmx:100816919 614.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00802 17 6714525 6717345 Gma17g00802 17 6714525 6717345 ECH
Gma17g00802 17 6714525 6717345 Gma05g00393 05 3710323 3712833 GST