Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00799 ATGGAATCCAAAGCCATAGATAATACTATTAAAATCCTCTATAGCTACGGCGGAAAGATCCTTCCTCGCCACACCGACGCCAAGCTCCGTTACTACGGCGGCCACACCAGAGTCCTCTCCCTCCATCCTTCCACTTCTTTCTCAGAGCTGATACTAAAGCTTACCGAGTTGTGCGCTTCGCCGGTCACACTTAAGTGTCCATTGCCGAACGGAGATTTGGACACCTTGATTTCCGTCACCAGCGACGAAGATTTGGCTAATATAATTCACTTATACGATCGAGCTTCTTCGTCGTTGCCTCATCGCTTGAAGATCAGAGCCATTCTTTCGCCGCCGAAGAAACTGTCTCCTTCTCCGTCTTCACCTTCTTCCAGCGCAGCTCACTCTCCGTCCGGTGGTTCGCCTCACTCCGCCGCCGATTCCCTGCCGTGCCCGGCGGCGCACCAGTTCGTCCGCCGTAAGTGCTCGCCGGTGCCGGTTGCGTATCCGATTAGCGTCCGTAGCGGAGCAGCAAAAGGCTGTATGTACACGAGGCAGTTAGACGGAAGTCCGAGATTCCTTTACCGTGGGGTTCACTGGAATAATTATTGCCACTGA 597 0.5343 MESKAIDNTIKILYSYGGKILPRHTDAKLRYYGGHTRVLSLHPSTSFSELILKLTELCASPVTLKCPLPNGDLDTLISVTSDEDLANIIHLYDRASSSLPHRLKIRAILSPPKKLSPSPSSPSSSAAHSPSGGSPHSAADSLPCPAAHQFVRRKCSPVPVAYPISVRSGAAKGCMYTRQLDGSPRFLYRGVHWNNYCH 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00799 198 PANTHER PB1 DOMAIN PROTEIN 1 198 - -
Gma17g00799 198 MobiDBLite consensus disorder prediction 112 140 - -
Gma17g00799 198 SUPERFAMILY CAD & PB1 domains 26 115 - -
Gma17g00799 198 CDD PB1_UP2 15 105 - -
Gma17g00799 198 Gene3D - 28 108 - -
Gma17g00799 198 MobiDBLite consensus disorder prediction 119 136 - -
Gma17g00799 198 Pfam PB1 domain 26 103 IPR000270 GO:0005515
Gma17g00799 198 PANTHER OS05G0427100 PROTEIN-RELATED 1 198 - -
Gma17g00799 198 SMART PB1_new 24 110 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00799 Gma-Chr17 6694318 6695034 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00799 10 119 MAP Kinase Kinase Kinase AT1G04700 45.455 9.64e-22 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00799 - - gmx:100815502 358.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00799 17 6694318 6695034 Gma17g00799 17 6694318 6695034 ECH
Gma17g00799 17 6694318 6695034 Gma04g01820 04 48313208 48314021 PCT
Gma17g00799 17 6694318 6695034 Gma06g01589 06 15431859 15433086 PCT
Gma04g01820 04 48313208 48314021 Gma17g00799 17 6694318 6695034 PCT
Gma06g01589 06 15431859 15433086 Gma17g00799 17 6694318 6695034 PCT