LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma17g00792	ATGGAGATTTCTGCCCTAGCTTCTTCTGCTACTCCAAGACCTTCTCTTACAACTCCTTCCACTTCTCCACACACTGTAGTCACCACCACCTTCAGCAAACCTCAACTGAGACGCTCCCACGTAGCAGTATCACTTCCTACCTCAACCACCATTTCACTGCTCGCTCTCTTCGCCCCTCCAAGCGAAGCCAAAGCCGCTGTCAGCATCGCCAAAGACCAGATTGTCTCATCTCTCACCCAAGTGGAGAAAACGCTGGATCAGGTTCAGGAAGTGGGTTCGGGTGTGCTGGACACGGCACAGCGTATTGCTGAAGTGATAGGGAACGCTTTGAAGCCTGGCATCGAAACGGCGTTGCCAATAGTTCAGCAGGCCGGAGAAGAAGCTTTGAAAATTGCTTCCCCTGCCATCTCCGAAGCTTCCAAGAAGGCCCAAGAAGCGCTCCAAAGCTCCGGTGTTGATACTGAACCTGTTATCTCTGCTGCTAAGACAGTGGCAGATGCTGCACAACAAACAACCAAGGTGATTGAAGTTGCCAAGCCAATAGCTTCCTCAACCGTCAAAACCATATCTTCTTCAGACCCTACTGTGATTGCTGGAACAGCAGGAGCACTATTTGTTGCTTACCTCCTAATTCCTCCTATCTGGTCTGTCATCTCGTCTAATCTTCGTGGTTACAAAGGAGACCTAACTCCTGCTCAAGCCCTTGATTTGATATCCACACAAAACTACGTTTTGATTGATATTAGGTCAGAGAAAGATAAGGACAAGGCTGGTATCCCTCGCCTTCCCTCTAATGCTAAAAACAGGATGGTTGCCATTCCTTTGGAAGAACTGCCAAGCAAGCTCAGAGGGCAGGTCAAGAATGTGAAGAAATTGGAAGCTGAAATAGTCGCTTTGAAGATTTCATATCTCAAGAAAATCAACAAAGGCACCAATGTTGTGATCTTGGATTCGTACTCGGACGTAGCAAAAACAGTTGGAAGAACACTAACCAGCCTTGGTTTTAAGAACACATGGATTGTTGCTGATGGATTCTCTGGGAACAAAGGGTGGTTGCAGAGTAGACTAGGAACAGATTCGTATAACTTCTCGTTCGCAGAGGTGCTGTCACCGTCAAGGGTCATCCCTGCGGCTGTGAGAAGTTTTGGCACAACCAGCCAATCTAGCACGAAGCTTCTTCCTGGGGCTGAATAA	1194	0.4791	MEISALASSATPRPSLTTPSTSPHTVVTTTFSKPQLRRSHVAVSLPTSTTISLLALFAPPSEAKAAVSIAKDQIVSSLTQVEKTLDQVQEVGSGVLDTAQRIAEVIGNALKPGIETALPIVQQAGEEALKIASPAISEASKKAQEALQSSGVDTEPVISAAKTVADAAQQTTKVIEVAKPIASSTVKTISSSDPTVIAGTAGALFVAYLLIPPIWSVISSNLRGYKGDLTPAQALDLISTQNYVLIDIRSEKDKDKAGIPRLPSNAKNRMVAIPLEELPSKLRGQVKNVKKLEAEIVALKISYLKKINKGTNVVILDSYSDVAKTVGRTLTSLGFKNTWIVADGFSGNKGWLQSRLGTDSYNFSFAEVLSPSRVIPAAVRSFGTTSQSSTKLLPGAE	397

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Gma17g00792	397	ProSiteProfiles	Rhodanese domain profile.	239	360	IPR001763	-
Gma17g00792	397	PANTHER	CALCIUM SENSING RECEPTOR, CHLOROPLASTIC	7	395	-	-
Gma17g00792	397	PANTHER	RHODANESE/CELL CYCLE CONTROL PHOSPHATASE SUPERFAMILY PROTEIN	7	395	IPR044690	GO:0009704\|GO:0071277\|GO:0090333
Gma17g00792	397	Gene3D	-	226	365	IPR036873	-
Gma17g00792	397	SUPERFAMILY	Rhodanese/Cell cycle control phosphatase	205	347	IPR036873	-
Gma17g00792	397	CDD	RHOD	233	347	-	-
Gma17g00792	397	Pfam	Rhodanese-like domain	230	347	IPR001763	-
Gma17g00792	397	SMART	rhod_4	229	357	IPR001763	-
Gma17g00792	397	MobiDBLite	consensus disorder prediction	1	29	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma17g00792	Gma-Chr17	6664847	6668256	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gma17g00792	1	318	Sulfurtransferasese or Rhodanese	AT5G23060	66.771	8.00e-151	427

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma17g00792	-		-	gmx:100813363	718.383

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gma17g00792	17	6664847	6668256	Gma17g00792	17	6664847	6668256	ECH
	Gma17g00792	17	6664847	6668256	Gma05g00150	05	1477569	1480643	GST

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