Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00792 ATGGAGATTTCTGCCCTAGCTTCTTCTGCTACTCCAAGACCTTCTCTTACAACTCCTTCCACTTCTCCACACACTGTAGTCACCACCACCTTCAGCAAACCTCAACTGAGACGCTCCCACGTAGCAGTATCACTTCCTACCTCAACCACCATTTCACTGCTCGCTCTCTTCGCCCCTCCAAGCGAAGCCAAAGCCGCTGTCAGCATCGCCAAAGACCAGATTGTCTCATCTCTCACCCAAGTGGAGAAAACGCTGGATCAGGTTCAGGAAGTGGGTTCGGGTGTGCTGGACACGGCACAGCGTATTGCTGAAGTGATAGGGAACGCTTTGAAGCCTGGCATCGAAACGGCGTTGCCAATAGTTCAGCAGGCCGGAGAAGAAGCTTTGAAAATTGCTTCCCCTGCCATCTCCGAAGCTTCCAAGAAGGCCCAAGAAGCGCTCCAAAGCTCCGGTGTTGATACTGAACCTGTTATCTCTGCTGCTAAGACAGTGGCAGATGCTGCACAACAAACAACCAAGGTGATTGAAGTTGCCAAGCCAATAGCTTCCTCAACCGTCAAAACCATATCTTCTTCAGACCCTACTGTGATTGCTGGAACAGCAGGAGCACTATTTGTTGCTTACCTCCTAATTCCTCCTATCTGGTCTGTCATCTCGTCTAATCTTCGTGGTTACAAAGGAGACCTAACTCCTGCTCAAGCCCTTGATTTGATATCCACACAAAACTACGTTTTGATTGATATTAGGTCAGAGAAAGATAAGGACAAGGCTGGTATCCCTCGCCTTCCCTCTAATGCTAAAAACAGGATGGTTGCCATTCCTTTGGAAGAACTGCCAAGCAAGCTCAGAGGGCAGGTCAAGAATGTGAAGAAATTGGAAGCTGAAATAGTCGCTTTGAAGATTTCATATCTCAAGAAAATCAACAAAGGCACCAATGTTGTGATCTTGGATTCGTACTCGGACGTAGCAAAAACAGTTGGAAGAACACTAACCAGCCTTGGTTTTAAGAACACATGGATTGTTGCTGATGGATTCTCTGGGAACAAAGGGTGGTTGCAGAGTAGACTAGGAACAGATTCGTATAACTTCTCGTTCGCAGAGGTGCTGTCACCGTCAAGGGTCATCCCTGCGGCTGTGAGAAGTTTTGGCACAACCAGCCAATCTAGCACGAAGCTTCTTCCTGGGGCTGAATAA 1194 0.4791 MEISALASSATPRPSLTTPSTSPHTVVTTTFSKPQLRRSHVAVSLPTSTTISLLALFAPPSEAKAAVSIAKDQIVSSLTQVEKTLDQVQEVGSGVLDTAQRIAEVIGNALKPGIETALPIVQQAGEEALKIASPAISEASKKAQEALQSSGVDTEPVISAAKTVADAAQQTTKVIEVAKPIASSTVKTISSSDPTVIAGTAGALFVAYLLIPPIWSVISSNLRGYKGDLTPAQALDLISTQNYVLIDIRSEKDKDKAGIPRLPSNAKNRMVAIPLEELPSKLRGQVKNVKKLEAEIVALKISYLKKINKGTNVVILDSYSDVAKTVGRTLTSLGFKNTWIVADGFSGNKGWLQSRLGTDSYNFSFAEVLSPSRVIPAAVRSFGTTSQSSTKLLPGAE 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00792 397 ProSiteProfiles Rhodanese domain profile. 239 360 IPR001763 -
Gma17g00792 397 PANTHER CALCIUM SENSING RECEPTOR, CHLOROPLASTIC 7 395 - -
Gma17g00792 397 PANTHER RHODANESE/CELL CYCLE CONTROL PHOSPHATASE SUPERFAMILY PROTEIN 7 395 IPR044690 GO:0009704|GO:0071277|GO:0090333
Gma17g00792 397 Gene3D - 226 365 IPR036873 -
Gma17g00792 397 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 205 347 IPR036873 -
Gma17g00792 397 CDD RHOD 233 347 - -
Gma17g00792 397 Pfam Rhodanese-like domain 230 347 IPR001763 -
Gma17g00792 397 SMART rhod_4 229 357 IPR001763 -
Gma17g00792 397 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00792 Gma-Chr17 6664847 6668256 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00792 1 318 Sulfurtransferasese or Rhodanese AT5G23060 66.771 8.00e-151 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00792 - - gmx:100813363 718.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00792 17 6664847 6668256 Gma17g00792 17 6664847 6668256 ECH
Gma17g00792 17 6664847 6668256 Gma05g00150 05 1477569 1480643 GST