Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00760 ATGGAATCTTGGAGCTATATCCCTGAAGAAAAGGAGTGTGTCTCCAATGAGGCACCCTCACCTCCCAACACTCTCGGGAGGAGTAAAAATTCTTTCTTGGGCTGGGAACTCAAAACCCCATGTGGTTTTTCCACCGACATGTTGGGTTTGGGTCACCACAGCATTGAGAATCAAGGTTTCGAGGAATTGGGGTTTCCTGAAATGTTGGGAAAACACATGTCCGATGATCTAGTTGCCAGTGTTCCAACCAGAAAGGTGGATGGTAATAGACAACAACAACAACACCACAGTGACAGAATCACTGGCACTGTTGTGGATGCCCCAAGTGGGTTTTCTCAAAGAGGGGACTCAAATTCCCTCATCGATTTGAAGCTGGGTCGATTTGCTGAGCATGGAGATTTCACTGATCCAGCGTTTTCCAAAGTTCTGTCTTCTTCTGAGTCATCAACGCCTCCTAAGAGAGTGCGAACTTCAGGGTTACATTCTCAGACTGCATATTGCCAAGTCTATGGCTGCAACAAGGATCTTAGCTCCTGTAAGGACTACCACAAGAGGCACAAGGTGTGTGAGGTTCACTCCAAGACTGCCATTGTTATAGTCAATGGCATTGAGCAAAGGTTTTGCCAGCAATGTAGTAGGTTTCATTTGCTGGCTGAATTTGATGATGGCAAGCGAAGCTGCCGAAAACGCCTTGCAGGTCATAATGAGCGTAGAAGAAAACCACAAATGGGTATTCACCCAGGAAAGTCTGGGACGTTGCTTCAGCCATGTGGGGATAGCAGATTCCAGGGATCCATGCTAACATCATCTTTTATCCGACCAGAGATGCTTCCAAGTGGGGTCATGTGTTCCGAGAAATATGGTATGAGTGACTTCTGGAGACCTATCAAAGCAGAACACGGGACTGGTTTTAGGAATCTTTCTTCTATGGCTGCAACCAATGGACATCCTCTGCCAAGATCTTTATTTTCATCATATAACGGAAAACAATTTCCCTTTCTTCATGAAAACAGTTCTACATCCACCACAGGAAGCATCTTCTGTGAGAGCAATAGCCACTATCCATCTGCCCTTGGGGCCCAAAATTCTGGATTGAGACCACTATTCCAGGACACTGTAGGAAATGAGGACTTCAGTGTTTTTGATACCTCACCAAATGTTCAAGGATTATCAGGGATTTCAGACTCTTGTTGTGCTCTCTCTCTTCTGTCATCTCAATCCCAGAACTCTTCAAGCCAATCATCAGGAATTCCCTTGGCTCACTCCTTGGTTATTCCAAGCAGTCATAGCCATCACTACAACATGAGTCAGGTCTCTGACAAGATAGGAATAAGCTCACAGACTTCTTCAAGCCGAGTGTCAGATAGTTTTCCACCAGAACTAAATCATGCCGATGGAAGCCATCTCAGTCCTGTATTAATATCAGGCAATAATGATATTATAAACTTTGATATGGCAGATGGTATCTTCCAAGGTTCAGATTACTTGAATGTGAAAGATCGTCTTTCCGATGAAGATGGTGCAACCATTGACTTGCTACAATTGTCATCACAGCTTCAGCGAGTTGAGCATGAGAGGCAATCCTTGCAGTGCTTTTGGAAGAGGAAACTAGTTGTGAAGCATGTGAAAGACACGCCTATGCCAATCATCTTAAGACAATGTAGGCCACAGGGGAATAGAAACTTCAAATGGTGCCATTCTGTTGCTAACTATTTACATTAG 1722 0.4443 MESWSYIPEEKECVSNEAPSPPNTLGRSKNSFLGWELKTPCGFSTDMLGLGHHSIENQGFEELGFPEMLGKHMSDDLVASVPTRKVDGNRQQQQHHSDRITGTVVDAPSGFSQRGDSNSLIDLKLGRFAEHGDFTDPAFSKVLSSSESSTPPKRVRTSGLHSQTAYCQVYGCNKDLSSCKDYHKRHKVCEVHSKTAIVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLAGHNERRRKPQMGIHPGKSGTLLQPCGDSRFQGSMLTSSFIRPEMLPSGVMCSEKYGMSDFWRPIKAEHGTGFRNLSSMAATNGHPLPRSLFSSYNGKQFPFLHENSSTSTTGSIFCESNSHYPSALGAQNSGLRPLFQDTVGNEDFSVFDTSPNVQGLSGISDSCCALSLLSSQSQNSSSQSSGIPLAHSLVIPSSHSHHYNMSQVSDKIGISSQTSSSRVSDSFPPELNHADGSHLSPVLISGNNDIINFDMADGIFQGSDYLNVKDRLSDEDGATIDLLQLSSQLQRVEHERQSLQCFWKRKLVVKHVKDTPMPIILRQCRPQGNRNFKWCHSVANYLH 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00760 573 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 42 531 IPR044817 GO:0003677
Gma17g00760 573 PANTHER 1 PROTEIN, PUTATIVE-RELATED 42 531 - -
Gma17g00760 573 ProSiteProfiles Zinc finger SBP-type profile. 164 241 IPR004333 GO:0003677
Gma17g00760 573 MobiDBLite consensus disorder prediction 1 27 - -
Gma17g00760 573 Gene3D - 158 228 IPR036893 GO:0003677|GO:0005634
Gma17g00760 573 Pfam SBP domain 167 240 IPR004333 GO:0003677
Gma17g00760 573 SUPERFAMILY SBT domain 165 244 IPR036893 GO:0003677|GO:0005634
Gma17g00760 573 MobiDBLite consensus disorder prediction 444 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00760 Gma-Chr17 6400038 6404348 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00760 121 282 SBP-box Gene Family AT1G69170 56.173 3.34e-53 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Gma17g00760 SBP 5.3e-31 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00182 05 1726805 1731558 Gma17g00760 17 6400038 6404348 ECH
Gma17g00760 17 6400038 6404348 Gma17g00760 17 6400038 6404348 ECH
Gma17g00760 17 6400038 6404348 Gma05g00182 05 1726805 1731558 GST