Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00701 ATGCTCCGCAAATTGTTCTTCCGCAAGCCTCCTGATGGACTCCTCGAGATCTGCGAGAGAGTTTACGTTTTTGATTGCTGCTTCACCACGGATGCTTGGAATGAAGAGAATTACAGAGTGTACATGGATGGGATAGTTGGTCAACTAAGGGAGAACTTGCCTGATGCTTCGATTCTGATTTTCAATTTTCGGGAGGAGGATACGAAGAGTCAGATGGCGAATATCATGTCTGAGTATGACATTACTATCATGGACTATCCTCGGCACTACGAGGGTGTTCCCGTGCTCAAAATGGAGCTCATTCACCACTTTTTGAGGTCTGGTGAAAGCTGGCTCTCGCTTAGCCAGCATAATGTGTTGCTGATGCATTGTGAACGTGGTGGTTGGCCTGTTTTGGCTTTCATGTTGGCTGCATTGTTGATTTATAGAAAGGTTTATACTGGGGAGCAGAGGACTCTGGATATGGTTTACAGGCAGGCTCCGCACGAGCTTTTGCATTTGTTGTCCCCGTTGAATCCGATCCCTTCCCAACTGAGGTATCTTCTGTATGTTTCCAGGAGGAATGTGGCCCTAGATTGGCCTCCCCTGGACAGGGCACTCATGTTGGACTGCATCATTATCAGATTCTTCCCAAACTTTGAGGGGGAAGGTGGTTGTCATCCCATTTTTAGAATATATGGACAGGATCCCTTTAGTGCTGATAAAAATCCAAAAATGTTGTACTCAACGCCAAAGAGAAGCAAAAATGTCCGGGCCTATAAGCAGGGAGAGTGTGAACTTATCAAAATCGATATCAATTGCCATATTCAAGGTGATGTTGTCATTGAGAGCATTAACTTGAATGGTAACATGGATCGTGAAAAGATGATGTTCCGAGTCATGTTCAACACAGCTTTTGTTAGATCTAATATTTTGATGCTTAACCGGGATGAAATTGACATTTTATGGGATGCTAAAGATCACTTTCCAAAAGATTTTAGAGCCGAGATCCTTTTCTCAGAGATGGATGCTGCTGCAGCAGTTATTGCGGATGGTACCTCATGCTTTGAGAAGGAAGGACTTCCAATTGAAGCATTTGCCAAGGTTCAAGAGATCTTTAGCCATGTAGACTGGATGAACCCCAAGGATGATGCTGCACTAAATGTGCTCCAACAGATGCGTGCTTCAGCTATGAATGACAGGTTGGATACAGTTTCTGATCAGTATGTGGAAAATGGCACTTTATTGCATGAAAAAAGTCCTAGAACGCCTCAGGGGAATTTGAGTGAAGCAAGACAGGGTTTATCCTCTACCAAGAGATCACCAGATAATGACAAGAGTAGAAAAGATGATAAGACCAACAAGGTTGAGGGTATTCCCCAACAACCTAATACATCTAACATCATGTATCAAGAGACAGCCAGATCTTCAGAAAGAACCATGGAATCCAATAAATGTCCAACAGGACCAACAAATCTTGACATAAAACTGCAGGCACCTCATCCTGCCTTATCTTCTTCTGTTGATACTGCTTTTCCCCCTAGAACACCTCCTTTGCGGCCTCGATCCACTAGTGCTAAAGAAGTTCATGATTCTCCTCGCCAAACAGAATCGCCCCCTTCTTATCTTTTGCCTTTGCAATCAAAACACCAATCACAAGACAGAAGTTCTAACCCTACTCCTGGGACCCAATTGTCATCTACTGTTCATAGTAAGTCACCAGAAGACACCATTTCTCATCCTTCATCTTCAGCAATTACTTCACCTCAGCTATCTCCTTCACTTTCTTCCAAAAATGTGAATGAGATTCCTCCTATTAGAACAAGACTAGAGTCTTCCCCTTCACAACCTCCAACTCCACCACCTCCTCCTACCCCTCCACTAAAGGATCATAGACTAGTTCGAGCTAAACCACCTCCACCACCACCTCCTCCTCCTAAGAAAGAAGTACATGTTAAAGCCGGACCCCTTCCTTCTCCTCTATCTCCTATGAATGTGGAGTCACAGGTTAGAGGTGGACCCTCTCCTCCCCCTCCCCCTCTTCCAAAAGAGGAGCGACCTGTTACATTTAATGCTCCTCCACCTCCACCACCTCCTTGTCTCTCGGGGAAAGTTGCAGGTTCTACTATAGcacctccaccaccaccaccaccagcacctccaccaccacTTTCCAGAGCATCACTTCCCTCAGATCACATTAATTCTTCGTTGCAAGAGTCTGcacctcctcctgcagcacctgctcctccacctcctcctggggcacctgctgttccacctcctcctggTAAAGGAGGTCTAAAATCAGGCAGTCCGTTTCCATTGTCTCTTTCTGTGAGTGGTGATGGGAATAATGTGTCCGGACCAACTAGCTCAAAGGGACGAATTCTATCACGTACGATCAACTCAAAGAATAACACCAAAAAGTTGAAGCCATTGCATTGGTTGAAACTATCTAGAGCAGTGCAAGGAAGTTTGTGGGCAGAGACACAGAAATCTGGCGAAGCTTCCAAGGCCCCAGAGATTGATCTTTCAGAGCTTGAGAATCTCTTCTCAGCAGCAGTCCCTTCAGGTCCTGCCAAAAAGTCAAATGTCCAAAGCTCAGCTGGCCCTAAATCTGATAAAGTGCAACTGATTGAGCATAGGCGAGCATATAATTGTGAAATCATGCTTTCAAAAGTGAAAGTGCCATTGCATGATTTAATGAGCTCAGTGTTAGCACTGGAGGAGTCAGCACTCGACACTGATCAGGTTGAGAACCTCATAAAGTTTTGTCCTACAAAAGAGGAGATGGAATTACTTAAGGGTTATAATGGGGAAAAGGAGAAGTTGGGAAGATGCGAACAGTTCTTAATGGAATTGATGAAAGTACCACGGGTGGAATCCAAGCTCAGAGTTTTTTCGTTCAGGATTCAATTCAACTCTCAGGTTGAAATATTGGTATTTTCATGCATCTTTACTAAAAAAAATGGATTTAAATCGATTTCTAATTTTGTTTCCTCTATTCAGATCAGGAATTCTGTCAAATTAAAGAGAATTATGCAAACAATACTTTCTTTAGGAAATGCTTTGAACCAAGGAACTGCCAAGGGTTCTGCTATTGGATTCAGATTGGATAGCCTTCTTAAACTCACAGAGACACGTGCACGGGACAAGAAGATGACTCTTATGCATTATCTTTGTAAGGTGCTAGATGACCAACTACCGGACGTTTTAGACTTCTCCAAGGATGTTGCTAACCTAGAGCCAGCAGCAAAGATGCAATTGAAGTTTTTGGCTGAGGAGATGCAAGCTATAAACAAAGGATTAGAAAAAGTGGTACAGGAACTATCAACCTCTGAAAATGATGGGCCTATATCAGAAACTTTCTGCAAGAAATTGAAAAAATTCCTCGGTTCTGCTGAAGCTGATGTCCGTTCTCTGGCTTCACTATATTCCAGCGTGGGTAGGAACGTGGATCAATTGATTCTCTATTTTGGTGAAGATCCAGCTCGTTGCCCATTTGAGCAAGTTGTGTCAACTTTGCTCAACTTTACTAGGATGTTCAACAAAGCCCATGAAGAAAACCGCAAGCAGCTAGAGCTTGAAATGAAGAAGACAGCAGAAATTACACAAGTAGTAGTAGCTGACATTGATAACCAAAACGAAGAGAACTGCAATACACTGCAAAGTTTAGAAATGGTGTAG 3669 0.4178 MLRKLFFRKPPDGLLEICERVYVFDCCFTTDAWNEENYRVYMDGIVGQLRENLPDASILIFNFREEDTKSQMANIMSEYDITIMDYPRHYEGVPVLKMELIHHFLRSGESWLSLSQHNVLLMHCERGGWPVLAFMLAALLIYRKVYTGEQRTLDMVYRQAPHELLHLLSPLNPIPSQLRYLLYVSRRNVALDWPPLDRALMLDCIIIRFFPNFEGEGGCHPIFRIYGQDPFSADKNPKMLYSTPKRSKNVRAYKQGECELIKIDINCHIQGDVVIESINLNGNMDREKMMFRVMFNTAFVRSNILMLNRDEIDILWDAKDHFPKDFRAEILFSEMDAAAAVIADGTSCFEKEGLPIEAFAKVQEIFSHVDWMNPKDDAALNVLQQMRASAMNDRLDTVSDQYVENGTLLHEKSPRTPQGNLSEARQGLSSTKRSPDNDKSRKDDKTNKVEGIPQQPNTSNIMYQETARSSERTMESNKCPTGPTNLDIKLQAPHPALSSSVDTAFPPRTPPLRPRSTSAKEVHDSPRQTESPPSYLLPLQSKHQSQDRSSNPTPGTQLSSTVHSKSPEDTISHPSSSAITSPQLSPSLSSKNVNEIPPIRTRLESSPSQPPTPPPPPTPPLKDHRLVRAKPPPPPPPPPKKEVHVKAGPLPSPLSPMNVESQVRGGPSPPPPPLPKEERPVTFNAPPPPPPPCLSGKVAGSTIAPPPPPPPAPPPPLSRASLPSDHINSSLQESAPPPAAPAPPPPPGAPAVPPPPGKGGLKSGSPFPLSLSVSGDGNNVSGPTSSKGRILSRTINSKNNTKKLKPLHWLKLSRAVQGSLWAETQKSGEASKAPEIDLSELENLFSAAVPSGPAKKSNVQSSAGPKSDKVQLIEHRRAYNCEIMLSKVKVPLHDLMSSVLALEESALDTDQVENLIKFCPTKEEMELLKGYNGEKEKLGRCEQFLMELMKVPRVESKLRVFSFRIQFNSQVEILVFSCIFTKKNGFKSISNFVSSIQIRNSVKLKRIMQTILSLGNALNQGTAKGSAIGFRLDSLLKLTETRARDKKMTLMHYLCKVLDDQLPDVLDFSKDVANLEPAAKMQLKFLAEEMQAINKGLEKVVQELSTSENDGPISETFCKKLKKFLGSAEADVRSLASLYSSVGRNVDQLILYFGEDPARCPFEQVVSTLLNFTRMFNKAHEENRKQLELEMKKTAEITQVVVADIDNQNEENCNTLQSLEMV 1222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00701 1222 MobiDBLite consensus disorder prediction 849 868 - -
Gma17g00701 1222 PANTHER FORMIN-J 1 1195 - -
Gma17g00701 1222 Coils Coil 1083 1103 - -
Gma17g00701 1222 MobiDBLite consensus disorder prediction 432 449 - -
Gma17g00701 1222 SUPERFAMILY Formin homology 2 domain (FH2 domain) 807 1193 - -
Gma17g00701 1222 Pfam Formin Homology 2 Domain 798 1176 IPR015425 -
Gma17g00701 1222 MobiDBLite consensus disorder prediction 408 431 - -
Gma17g00701 1222 SMART PTEN_C2_2 195 334 IPR014020 -
Gma17g00701 1222 MobiDBLite consensus disorder prediction 450 484 - -
Gma17g00701 1222 Pfam C2 domain of PTEN tumour-suppressor protein 198 334 IPR014020 -
Gma17g00701 1222 ProSiteProfiles C2 tensin-type domain profile. 197 335 IPR014020 -
Gma17g00701 1222 MobiDBLite consensus disorder prediction 630 644 - -
Gma17g00701 1222 SMART it6_source 794 1221 IPR015425 -
Gma17g00701 1222 MobiDBLite consensus disorder prediction 767 799 - -
Gma17g00701 1222 MobiDBLite consensus disorder prediction 528 606 - -
Gma17g00701 1222 MobiDBLite consensus disorder prediction 736 761 - -
Gma17g00701 1222 MobiDBLite consensus disorder prediction 853 867 - -
Gma17g00701 1222 Gene3D - 194 338 - -
Gma17g00701 1222 MobiDBLite consensus disorder prediction 702 720 - -
Gma17g00701 1222 Gene3D Protein tyrosine phosphatase superfamily 12 189 IPR029021 -
Gma17g00701 1222 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 199 335 IPR035892 -
Gma17g00701 1222 Gene3D Formin, FH2 domain 792 1187 IPR042201 -
Gma17g00701 1222 ProSiteProfiles Formin homology-2 (FH2) domain profile. 794 1202 IPR015425 -
Gma17g00701 1222 Coils Coil 1177 1197 - -
Gma17g00701 1222 MobiDBLite consensus disorder prediction 607 622 - -
Gma17g00701 1222 MobiDBLite consensus disorder prediction 665 695 - -
Gma17g00701 1222 MobiDBLite consensus disorder prediction 408 799 - -
Gma17g00701 1222 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 10 185 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00701 Gma-Chr17 5963904 5974293 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00701 1 396 Protein tyrosine phosphatase (PTP) family AT5G58160 65.915 0.0 594
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00701 - - gmx:100799319 2177.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00701 17 5963904 5974293 Gma05g00239 05 2181336 2194559 GST