Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00661 ATGCCTCTCTCCTGTCTCCTCCTCCTCCTCCTCTTCTTCCTCTCACGCCACACTCTCTCTTCCGCTTCTCAGCCTCGCAATCCCGAAGTGGAGGCTTTGATCAACATTAAAGGAGGTCTGAATGACCCTCACGGCGTCCTCAACAACTGGGATGAATACTCCGTCGACGCTTGCAGCTGGACCATGATCACTTGCTCTTCTGATTACCTTGTCATAGGCCTTGGAGCGCCTAGCCAATCTCTCTCCGGAACTTTATCTCCGGCTATCGAAAATCTAACAAATCTTCGACAAGTATTACTGCAGAACAACAATATCTCAGGCAATATACCACCGGAACTTGGAAACCTTCCCAAGCTTCAGACATTAGACCTTTCCAATAACCGTTTCTCGGGGCTCATTCCTGCATCTCTTAGTCAATTGAATAGTCTCCAGTACTTGAGGCTCAACAACAATAATTTGTCCGGATCCTTTCCCGTGTCACTGGCCAAAACCCCACAGCTTGCTTTCTTGGACTTGTCTTATAACAATCTCAGTGGACCATTGCCCAAGTTCCCAGCCAGGTCATTCAATATTGTGGGGAACCCATTAGTTTGTGGAAGCAGCACTACTGAAGGTTGCTCTGGCTCAGCAACCCTCATGCCCATCTCTTTCTCGCAAGTGTCATCAGAAGGAAAACACAAGTCCAAAAGACTAGCAATAGCTTTTGGGGTCAGTCTTGGTTGTGCTTCTCTCATCCTTCTGCTTTTTGGGCTATTGTGGTATAGAAAGAAACGACAGCACGGAGTCATCCTTTATATCAGTGATTATAAGGAAGAGGGAGTTCTTAGCTTGGGAAATCTAAAAAAATTCACTTTCAGAGAGCTCCTACATGCCACGGATAATTTCAGCTCCAAGAATATACTTGGTGCTGGAGGCTTTGGCAATGTCTATAGGGGGAAGCTTGGAGATGGCACAATGGTGGCGGTGAAAAGGCTGAAAGATGTAAATGGTAGTGCTGGTGAATCACAGTTCCAAACTGAGTTGGAGATGATCAGCTTGGCAGTTCATCGCAATTTACTTCGCTTAATTGGATATTGTGCTACTTCTAGTGAGAAACTTTTGGTTTATCCTTATATGTCTAATGGTAGTGTGGCCTCCAGGCTTAGAGGAAAACCAGCTTTAGATTGGAACACAAGAAAGAGGATAGCAATTGGAGCTGCCAGAGGTCTTCTGTATTTGCACGAGCAATGTGATCCAAAGATAATACACAGAGATGTTAAGGCTGCCAATGTGCTTCTGGATGACTATTGTGAGGCTGTTGTTGGAGATTTTGGCCTTGCAAAGCTCCTTGACCATGCTGATTCTCATGTCACCACTGCTGTCCGTGGCACTGTTGGACACATTGCACCAGAGTACCTTTCCACCGGCCAATCATCTGAGAAAACAGATGTCTTTGGATTTGGCATTCTCTTGTTGGAGCTCATAACCGGAATGACAGCACTCGAGTTTGGGAAAACGGTGAATCAAAAAGGTGCTATGCTAGAATGGGTTAGGAAAATACTACATGAAAAGAGGGTTGCAGTGTTGGTGGACAAAGAGCTTGGAGACAATTATGATAGAATAGAGGTGGGGGAGATGCTGCAAGTTGCTTTACTGTGTACTCAATATTTGACAGCCCACCGCCCTAAAATGTCCGAAGTGGTTCGAATGCTTGAAGGTGATGGGCTTGCTGAGAAGTGGGCATCATCACATAATTACGGTAATCAAGACATGAACTCCAGTCACAGTCACAGCAACAGCAACAATAGCAATACTTCATCCCGCCCTACCTCTGCTTCCAAACATGATGATGATGTTAATGACCGTTCCAGCATGCTTGGCATGACAATGGATGATGATGATGAACAGTCTTTGGAATCCTATGCCATGGAACTCTCTGGTCCTAGATAA 1929 0.4546 MPLSCLLLLLLFFLSRHTLSSASQPRNPEVEALINIKGGLNDPHGVLNNWDEYSVDACSWTMITCSSDYLVIGLGAPSQSLSGTLSPAIENLTNLRQVLLQNNNISGNIPPELGNLPKLQTLDLSNNRFSGLIPASLSQLNSLQYLRLNNNNLSGSFPVSLAKTPQLAFLDLSYNNLSGPLPKFPARSFNIVGNPLVCGSSTTEGCSGSATLMPISFSQVSSEGKHKSKRLAIAFGVSLGCASLILLLFGLLWYRKKRQHGVILYISDYKEEGVLSLGNLKKFTFRELLHATDNFSSKNILGAGGFGNVYRGKLGDGTMVAVKRLKDVNGSAGESQFQTELEMISLAVHRNLLRLIGYCATSSEKLLVYPYMSNGSVASRLRGKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDYCEAVVGDFGLAKLLDHADSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMTALEFGKTVNQKGAMLEWVRKILHEKRVAVLVDKELGDNYDRIEVGEMLQVALLCTQYLTAHRPKMSEVVRMLEGDGLAEKWASSHNYGNQDMNSSHSHSNSNNSNTSSRPTSASKHDDDVNDRSSMLGMTMDDDDEQSLESYAMELSGPR 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00661 642 ProSiteProfiles Protein kinase domain profile. 295 550 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma17g00661 642 MobiDBLite consensus disorder prediction 575 603 - -
Gma17g00661 642 ProSitePatterns Protein kinases ATP-binding region signature. 301 323 IPR017441 GO:0005524
Gma17g00661 642 ProSitePatterns Serine/Threonine protein kinases active-site signature. 414 426 IPR008271 GO:0004672|GO:0006468
Gma17g00661 642 SMART LRR_typ_2 92 115 IPR003591 -
Gma17g00661 642 SMART LRR_typ_2 116 139 IPR003591 -
Gma17g00661 642 SMART LRR_typ_2 140 163 IPR003591 -
Gma17g00661 642 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 6 642 - -
Gma17g00661 642 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 6 642 - -
Gma17g00661 642 Gene3D Transferase(Phosphotransferase) domain 1 372 582 - -
Gma17g00661 642 Gene3D Phosphorylase Kinase; domain 1 265 371 - -
Gma17g00661 642 Pfam Leucine rich repeat N-terminal domain 27 66 IPR013210 -
Gma17g00661 642 SUPERFAMILY L domain-like 26 194 - -
Gma17g00661 642 Pfam Leucine rich repeat 117 177 IPR001611 GO:0005515
Gma17g00661 642 Gene3D Ribonuclease Inhibitor 26 208 IPR032675 -
Gma17g00661 642 MobiDBLite consensus disorder prediction 575 642 - -
Gma17g00661 642 SUPERFAMILY Protein kinase-like (PK-like) 277 565 IPR011009 -
Gma17g00661 642 ProSiteProfiles Leucine-rich repeat profile. 118 139 IPR001611 GO:0005515
Gma17g00661 642 Pfam Protein kinase domain 296 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma17g00661 642 SMART serkin_6 295 550 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma17g00661 642 PRINTS Leucine-rich repeat signature 119 132 - -
Gma17g00661 642 PRINTS Leucine-rich repeat signature 164 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00661 Gma-Chr17 5627093 5631864 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00661 1 510 Receptor kinase-like Gene Family AT2G23950 76.667 0.0 796
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Gma17g00661 Pkinase 2.9e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00661 - - gmx:100775565 1229.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00661 17 5627093 5631864 Gma17g00661 17 5627093 5631864 ECH