Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00645 ATGCGAAATATCAACTCGGTGAAGGAAGAATTTCTGAAGAAATGGATATGGGGTCTGAGAAAATATAGCTCTCAGAAGAAGAACATGAGTCTGATGGAGAGAAAGAAAGCCATAAAGCTGTCAGCAGATTTAGCTATGGCTTCCACCAGAAACAAAACCACTCGCTGGAGCAGGGCCCTTATTGCCAATGCTTCAAGAGATGGCAACAACAACAAAGTCCTCGCAGAACACGTGACATCATCACCACAGAGGCCGGTAGCAGGGAAAAGCTTCACAGCAAGGATCAGAAGCTGCAGAAACATGTTGAGAAGAAACCGTGCAGTGCACAGCAGAGCAAAAGATAGGGTGGTGGCGAGTTCCGTTGCGAAGAGGCTGGTTCAGAAGAGAACGCGAAGGCTCAAGAGTCTCTTACCAGGAGGAGAATCCATGGACGGTGTGTCTTTGGTTGAAGAAACCCTAGATTATATACAATCACTGCGAGCTCAAGTTGAAGTAATGAGAAGTCTTGTCACTGCCTCAGAGATCAAGATCCTAAATCCATCGTAA 546 0.4615 MRNINSVKEEFLKKWIWGLRKYSSQKKNMSLMERKKAIKLSADLAMASTRNKTTRWSRALIANASRDGNNNKVLAEHVTSSPQRPVAGKSFTARIRSCRNMLRRNRAVHSRAKDRVVASSVAKRLVQKRTRRLKSLLPGGESMDGVSLVEETLDYIQSLRAQVEVMRSLVTASEIKILNPS 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00645 181 CDD bHLH_AtIBH1_like 115 170 IPR044549 GO:0006355
Gma17g00645 181 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 6 172 - -
Gma17g00645 181 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 6 172 IPR044660 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00645 Gma-Chr17 5490239 5491527 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00645 1 177 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30410 42.778 6.99e-35 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00645 - - gmx:100814789 348.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00645 17 5490239 5491527 Gma17g00645 17 5490239 5491527 ECH
Gma17g00645 17 5490239 5491527 Gma13g00724 13 21403259 21404600 GST