Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00619 ATGGGGCTTGTAAAAAAAATTGGGAAGTATCAGCTTGGTAGGACAATTGGAGAAGGTACATTCTCTAAGGTTAAGCTGGCTGTCAATGGCAACAATGGTCAGAAGGTTGCGATCAAGGTCATTGATAAGCATATGGTCCTGGAAAACAATCTTAAGAATCAGGCAAACCTCACCCCTGTTAAAAGAGAGATCAGAACAATGAAACTTCTCCATCATCCAAATATAGTTAGAATTCACGAGGTTATTGGCACAAAAACGAAGATATACATTGTGATGGAATATGTTTCAGGAGGACAGCTATTAGACAAGATATCCTATGGAGAGAAGTTGAATGCATGTGAGGCAAGAAAACTATTCCAGCAACTTATTGATGCCCTGAAATACTGCCATAACAAAGGGGTTTATCATCGAGATCTCAAGCCAGAAAACTTGCTTCTTGACAGCAAGGGAAATCTCAAAGTGTCTGATTTTGGATTAAGTGCATTGCAAAAGCATAACGATGTCTTAAACACGCGGTGTGGATCCCCAGGCTATGTGGCACCTGAGCTGCTATTGAGCAAGGGGTATGATGGAGCAGCTGCTGATGTTTGGTCATGTGGGGTGATCCTTTTTGAATTACTTGCAGGCTATTTACCATTTAACGACCGGAACTTGATGAACTTATATGGAAAGATATGGAAGGCAGAATATAGATGTCCCCCATGGTTTACTCAGAATCAAAAGAAACTAATTGCCAAAATACTTGAACCACGTCCTGTAAAGCGGATAACTATACCAGATATTGTTGAAGATGAGTGGTTTCAGACTGACTACAAGCCTGTTTTTGCATCTGAATTTGATCAGAACATTAACTTGGATGATGTTGATGTTGCTTTCAATTCAATTAAGGAGAATATCAGAGAGTCAACGATACCCAAGTCCTCAAGTTTCATTAATGCGTTTCAACTAATAGCCATGTCTCAGGACCTTGATCTATCTGGCCTTTTTGAAGAACAGGATGAAAAAAAGCAGAGAACAAGGCTGGGATCCAAACACACTATCAATGAAACGATAGAAAAAATAGAAGCTGCCGCAACAGATGTAGGATTGTCAATAGAGAAAATGAACAACTTTAAGATAAAAATGCAACCAAAACAGATAATGACTAGGTGTTCTAGATCATACCTATCAGCCCAGGTGATTGAAGTTGCTCCAACTCATTGTGTTATAGAAATATCAAAATCTACAGGAGATCTAAGAGTGTACCATAAAGTAAGAAAACATCCTCTTAGTCTTAGCTTAATGTGCAAGCACGTGAATTTAGTTACTAATTTTAATTTTAATTATCAGTTTTGTGAAAGTTTATCAAATCTGCTGAAACAAAAACCTGATGTGCCATCACAAAGCCAAGATTCAGTAGATCTATGTGCCGCTGAAAGAAAAAAACAAGATGCTGGATGCTACGAAGAGCCAAAAAGTGAAGATAGCAAACCTCTTCCTGGCTATAAATCTGCTTGA 1497 0.3848 MGLVKKIGKYQLGRTIGEGTFSKVKLAVNGNNGQKVAIKVIDKHMVLENNLKNQANLTPVKREIRTMKLLHHPNIVRIHEVIGTKTKIYIVMEYVSGGQLLDKISYGEKLNACEARKLFQQLIDALKYCHNKGVYHRDLKPENLLLDSKGNLKVSDFGLSALQKHNDVLNTRCGSPGYVAPELLLSKGYDGAAADVWSCGVILFELLAGYLPFNDRNLMNLYGKIWKAEYRCPPWFTQNQKKLIAKILEPRPVKRITIPDIVEDEWFQTDYKPVFASEFDQNINLDDVDVAFNSIKENIRESTIPKSSSFINAFQLIAMSQDLDLSGLFEEQDEKKQRTRLGSKHTINETIEKIEAAATDVGLSIEKMNNFKIKMQPKQIMTRCSRSYLSAQVIEVAPTHCVIEISKSTGDLRVYHKVRKHPLSLSLMCKHVNLVTNFNFNYQFCESLSNLLKQKPDVPSQSQDSVDLCAAERKKQDAGCYEEPKSEDSKPLPGYKSA 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00619 498 MobiDBLite consensus disorder prediction 474 498 - -
Gma17g00619 498 ProSitePatterns Protein kinases ATP-binding region signature. 16 39 IPR017441 GO:0005524
Gma17g00619 498 Gene3D Kinase associated domain 1, KA1 307 429 - -
Gma17g00619 498 Gene3D Transferase(Phosphotransferase) domain 1 97 292 - -
Gma17g00619 498 Gene3D Phosphorylase Kinase; domain 1 3 96 - -
Gma17g00619 498 SUPERFAMILY Protein kinase-like (PK-like) 7 268 IPR011009 -
Gma17g00619 498 CDD CIPK_C 312 418 - -
Gma17g00619 498 PANTHER SERINE/THREONINE KINASE 6 425 - -
Gma17g00619 498 Pfam NAF domain 309 367 IPR004041 GO:0007165
Gma17g00619 498 ProSiteProfiles Protein kinase domain profile. 10 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma17g00619 498 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 21-RELATED 6 425 - -
Gma17g00619 498 SMART serkin_6 10 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma17g00619 498 MobiDBLite consensus disorder prediction 474 490 - -
Gma17g00619 498 ProSitePatterns Serine/Threonine protein kinases active-site signature. 134 146 IPR008271 GO:0004672|GO:0006468
Gma17g00619 498 Pfam Protein kinase domain 10 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma17g00619 498 ProSiteProfiles NAF domain profile. 306 330 IPR018451 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00619 Gma-Chr17 5216947 5219861 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00619 6 418 CBL-interacting serine-threonine protein kinases AT1G01140 50.360 6.49e-146 424
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Gma17g00619 Pkinase 5.3e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00619 - - gmx:100786097 919.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00619 17 5216947 5219861 Gma17g00619 17 5216947 5219861 ECH