Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00611 ATGAAGAAACCAACAACCGACGCAATTAGTATGGGGAAAAGGAGCCTGGAGGGTGGAGAAGATGACCAGCCTGAACGAAAGAGGCCTGCTCTTGCCAGTGTAATTGTGGAAGCTCTGAAGGTGGACAGTTTGCAGAAGCTTTGCTCATCTTTAGAACCCATTCTTCGTAGAGTTGTCAGTGAAGAAGTGGAGCGTGCTTTGGCAAAGTTAGGTCCTGCAAGACTTAGTGGAAGGTCTCCTCCTAAAATGATTGAAGGCCCTGATGGTAGAAGCTTGCAGCTGAAATTTAGGTCCCGGTTGTCTCTTCCCCTATTCACAGGAGGAAAAGTGGAAGGCGAGCAGGGGGCTCCAATACATGTTGTTCTGATTGATGCCAATAGTGGAAGCATTGTAACATCTGGACCTGAATCCTGTGTTAAACTTGATGTTGTTGTCCTTGAAGGTGATTTTAACAATGAAGATGATGAAGATTGGACTCAGGAGGATTTTGAAAGCCATGTGGTAAAAGAACGTGAAGGAAAGAGACCTTTGTTAACTGGGGACCTGCAAGTGACACTCAAGGAAGGAGTTGGGACATTAGGGGAACTGACATTTACAGATAATTCCAGCTGGATAAGGAGTCGGAAATTCAGGCTTGGCTTGAAGGTTGCATCAGGTTTTTGCGAGTCCATACGCATTCGTGAAGCTAAGACAGTGGCTTTCATAGTTAAAGATCATAGAGGAGAATTATATAAGAAGCATTATCCACCTGCATTGACTGATGAAGTGTGGAGATTGGAGAAGATAGGCAAGGATGGGTCATTTCATAAGAAGCTGAATAGTGCAGGAATAGTCACAGTTGAAGACTTTCTTCGGCTTGTGGTTAAAGATCAACAAAGATTGCGGAATATCCTTGGGAGTGGTATGTCAAACAAGATGTGGGAGGCTCTTTTAGACCATGCAAAAACATGTGTTCTAAGTGGGAAGCTCTATGTTTATTATCCAGAAGATGCAAGAAATGTTGGCGTTATTTTTAACAACATCTATGAGCTGCGTGGCCTTATATCAGGAGACCAATTCTATTCTGCTGATTCTCTCACTGATAGCCAGAAGGTTTATGTAGATTCATTGGTGAAGAAAGCATATGAAAATTGGGATCAGGTTGTGGATTATGATGGCAAATCACTCGTGAATGCTAAAATTTCTTCTGAAAATGAACTTCATGTGGAGTCAATTGATTATGGTAGTGGTTTAGATCATCAACTGCAACTGCCGGTCCTTCCAGTGTCTGTTCCTTCTGAACAGCAAATCAATTCAGGGATACCTGTTGGAGGTTACAACGATAATAATATAGTAACACGATATCCAACCCAGTCATTGATTCCAAACTCCAGCTCCCGGAATCAGTTCGATAGCTCATTATATGTGTCGAATGACCAATTAATCAGCAATGCTCACCAAACCCAAAGCACTAGTAATGATCATGGCACCGTTGGGTTAGCTCTTGGTCCTCCTCAATCATCGACATCAGGGTTCCATGCTGGCAGCTCTTCTGCTATAAATCCTTTTGATGATTGGTCCCACAACAGGGACAAGGGGGCTGATGAATTCTTTTCGGAAGAAGAAATCCGCTTCAGAAGTCACGAGATGCTAGAGAATGAAGATATGCAGCAGTTGCTTCGCCTCTTCAGCATGGGAGGTCATGGCTCCATGAGTGCTGAGGATGGCTTTTCATTCCCATCATTCATGCCATCTCCCAGTATACCGAACTATGATGAGGATCGCTCTCGCCCAGGCAGAGCTGTTGTGGGATGGCTGAAGATCAAGGCAGCAATGAGGTGGGGCTTCTTTATCAGGAAGATAGCCGCTGAGAAGCGGGCACAGATAGAGGAGTTAGATGAATAA 1884 0.4406 MKKPTTDAISMGKRSLEGGEDDQPERKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALAKLGPARLSGRSPPKMIEGPDGRSLQLKFRSRLSLPLFTGGKVEGEQGAPIHVVLIDANSGSIVTSGPESCVKLDVVVLEGDFNNEDDEDWTQEDFESHVVKEREGKRPLLTGDLQVTLKEGVGTLGELTFTDNSSWIRSRKFRLGLKVASGFCESIRIREAKTVAFIVKDHRGELYKKHYPPALTDEVWRLEKIGKDGSFHKKLNSAGIVTVEDFLRLVVKDQQRLRNILGSGMSNKMWEALLDHAKTCVLSGKLYVYYPEDARNVGVIFNNIYELRGLISGDQFYSADSLTDSQKVYVDSLVKKAYENWDQVVDYDGKSLVNAKISSENELHVESIDYGSGLDHQLQLPVLPVSVPSEQQINSGIPVGGYNDNNIVTRYPTQSLIPNSSSRNQFDSSLYVSNDQLISNAHQTQSTSNDHGTVGLALGPPQSSTSGFHAGSSSAINPFDDWSHNRDKGADEFFSEEEIRFRSHEMLENEDMQQLLRLFSMGGHGSMSAEDGFSFPSFMPSPSIPNYDEDRSRPGRAVVGWLKIKAAMRWGFFIRKIAAEKRAQIEELDE 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00611 627 PANTHER CALMODULIN-BINDING PROTEIN 60 B 9 626 - -
Gma17g00611 627 Pfam Calmodulin binding protein C-terminal domain 322 384 IPR046829 -
Gma17g00611 627 MobiDBLite consensus disorder prediction 479 508 - -
Gma17g00611 627 Pfam Calmodulin binding protein-like N-terminal domain 92 239 IPR046831 -
Gma17g00611 627 MobiDBLite consensus disorder prediction 1 28 - -
Gma17g00611 627 PANTHER OS02G0177800 PROTEIN 9 626 IPR012416 GO:0005516
Gma17g00611 627 MobiDBLite consensus disorder prediction 14 28 - -
Gma17g00611 627 Pfam Calmodulin binding protein central domain 252 317 IPR046830 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00611 Gma-Chr17 5156203 5161186 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00611 1 622 Calmodulin-binding Proteins AT5G57580 67.868 0.0 858
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00611 17 5156203 5161186 Gma17g00611 17 5156203 5161186 ECH
Gma17g00611 17 5156203 5161186 Gma13g00757 13 21765923 21771813 GST