Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00599 ATGAGAGAATATTGGACCTCGTTGGCTTCAGTTTTGGGTGTGTTTGCCTTCTGCCAAACCATCCTCCAAGCAGTGTTCCCACCGGAGCTGCGCTTCGCTTCCGTGAAGCTCTTCCACCGGGTCTTCCACTGCTTCTCCACCTACTGCTACTTCGACATAACGGAGATCGACGGTGTGAACACCAACGAGCTCTACAACGCCGTCCAGCTGTACCTGAGCTCCTCCGTCTCCATCACCGGCAACCGGCTGAGCCTCACACGCGCCGTGAACTCGTCCGGGTTCACCTTCGGCCTCGCGAACAATGACAGCATCGTGGACACCTTCAACGGCGTGAACGTGCTGTGGGAGCACGTGGTGACCCAGCGGCAGGCCCAGACCTTCTCGTGGCGGCCACTCCCCGACGAGAAGCGTGGTTTCACGCTCCGCATAAAAAAAAAGGACAAGTCCTTCATACTAAACTCCTACTTGGATTACATTATGGAGAAAGCCAGCGACATTCGGAGGAAGAATCAGGATCGGCTCCTCTACACCAATTCCAGGGGTGGCTCCCTGGACTCGCGGGGCCACCCTTGGGAATCTGTGCCTttcaagcacccaagcacgtttgacacattggccatggaccctcacaagaagaagcagatcatggaggatcttcaggacttcgccaatgggcaatctttttaccataaaaccggtagggcttggaagagaggctaccttctctatggccctccagGTTACTATGATTCGGAGATACGCGGTGGCGGCGGTGGTTGTGCTgaggagggtgAGTGTGAGCTTGAGGAGTCGATTTTGAAGCGGCTGGAGGAGGTTGTCGACGTGGCCCGGATGACTCCGGCGGATATAAGCGAGGTTTTGATCAAGAACAGACGCAAGAGAGAGAAGGCGGTGGAGGAGTTGTTGGAGACTTTGAAGCTGAGAGCGGAGATGAATGAAAAAAATGGAGTTCTGAGGGTGAATAATGGGGTTGAAGAGGAGGAAGAGCAAGAGAAGAGGGCTTTAGACAGTGAGAGTCCTAAGCAGGAGTCAGAGATTGAGGACAATTGCAAGGAGGAGGAGGAAGAAGAAGAGAAGATCAAGGCTTTACACCCTGACATGCTTGGGGAGCCAGCTGAGATGTTGGTGAACACCTGGGTGCACATGGCATGGGAAAGGCTATCAGGTTGTCAAGCTAAGAGTAGTGCTGTGTACTTTAAGAAAAAGGGAATGTACCAAAAACAAAAGGCTATAGAGAAGGGTTTGGCTCAAGGGAAAGTGTCATTATTTGCTGCAGTCATGGATACTGATGAGGAGTGTTCAATTGTTCTTGAATTATCTGAAAGAGATCCTTTCTTTGACAAAAAGAAGAAATTACTACAAAGTAAGGGCTTTAGTCCCAAAGAACGGATATACCTCAAGAGCTCTTCAAAACCTGGCTGGATGAATGCTACTGTGGAGGTCTTACTTCAGATTGCACGAATCGTACAATTAAATGAGCTGGAACTTTATTTTGCTGAAGATGATGTATGCACGTCAATGGAGTCTTACAGTCCCAGGAATGAGCTGGAGGCTCTCAATTCAATTGTTTTGCTCACTGACATATCACTTTCTACTTGTACACATCTGCATACAAATATCTTGCAAGGGTTACGCCAAACAATTCTTGATTTAATTTCTGATTTTGGGGACAAAAACAGTGTGAAGGGAGTAGTTGAAAAAAACCACAGTTGTGACCAAGAAGAACGCCTGCTAGAATGGGGTGAAAGCAATGGTTTAATGACACAGTTAAAAATAGCTTATATTGAAGGAGCCAGTCGGGGTGCAATAGCAAGGAAAGATCTAAAAGTTGGAGACATTGCTTTGGAAATTCCTGTGTCCATTATCATTTCCGAAGAGCTTGTGCATGAAACCGATATGTATGGTGTCTTAAAAGAGATTGATGGCATATCATCTGAGACAATATTGCTATTATGGAGTATGAAAGAAAAGTACAACTGTGATTCAAAATTCAAAATTTACTTTGACACACTCCCAGAAAAATTTAATACAGGTTTGAGTTTCAGCATTCAAGCAATTACAATGTTAGATGGAACCTTGCTGTTGGAAGAGATAATGCAAGCAAGACAGCACTTGCATGCTCAATATGATGAGTTGTTCCCTGCTCTGTGCAATAATTTTCCTGATATATTTCCACCAGAGCTGTACACATGGGAGAAATTTTTATGGGCTTGTGAACTTTGGTACTCTAATAGCATGAAGATCATGTATTCTGATGGAAAGCTAAGAACATGCTTGATCCCTCTTGCTGGCTTTCTCAATCATTCACTATGCCCACATGTTATGCACTATGGCAAAGTGGATCCCGCAACAAATTCCCTGAAATTTTGTCTATCAAGACCATGCAGATCTGGAGAAGAATGCTGCTTAAGCTACGGGAACTTCTCCAGCTCTCATCTAATTACCTTTTATGGTTTCTTACCACAAGGAGACAACTCGTATGATGTTATTCCGTTAGACATTGACGGTTCTGACGTTGATTCTAATGAGGATATACCTGTGTCCAACTGGACGACTCACATGGTGCGTGGTACTTGGCTCTCCAAGGATCACAGGATATTCAATTATGGCCTTCCCTCTCCATTATTGGACCATCTTAGGAGATCTCGAAGTCCCATGCTAAGAACAAAGACTTTTTTGCAAGGAAGCTTGGAAAATGAGCTGGAAGTTCTTGAAAATCTCAAAGATATCTTTGATGATATGATGGAAAATATGGGCAAGATCGATCTTGACGACAGAGAAAACTGCAGTTGGGATGAAAAATTGGCTATGGATTTTAAAGATCTACAAAGACGAATTGCCTGTTCTGTTTCAACTTCGTGTCACACAGGCATGGACATGTTGAAGAACGAACTATGCAAGTGCATGGCTGAGGACATCCTAGGCTAA 2949 0.4252 MREYWTSLASVLGVFAFCQTILQAVFPPELRFASVKLFHRVFHCFSTYCYFDITEIDGVNTNELYNAVQLYLSSSVSITGNRLSLTRAVNSSGFTFGLANNDSIVDTFNGVNVLWEHVVTQRQAQTFSWRPLPDEKRGFTLRIKKKDKSFILNSYLDYIMEKASDIRRKNQDRLLYTNSRGGSLDSRGHPWESVPFKHPSTFDTLAMDPHKKKQIMEDLQDFANGQSFYHKTGRAWKRGYLLYGPPGYYDSEIRGGGGGCAEEGECELEESILKRLEEVVDVARMTPADISEVLIKNRRKREKAVEELLETLKLRAEMNEKNGVLRVNNGVEEEEEQEKRALDSESPKQESEIEDNCKEEEEEEEKIKALHPDMLGEPAEMLVNTWVHMAWERLSGCQAKSSAVYFKKKGMYQKQKAIEKGLAQGKVSLFAAVMDTDEECSIVLELSERDPFFDKKKKLLQSKGFSPKERIYLKSSSKPGWMNATVEVLLQIARIVQLNELELYFAEDDVCTSMESYSPRNELEALNSIVLLTDISLSTCTHLHTNILQGLRQTILDLISDFGDKNSVKGVVEKNHSCDQEERLLEWGESNGLMTQLKIAYIEGASRGAIARKDLKVGDIALEIPVSIIISEELVHETDMYGVLKEIDGISSETILLLWSMKEKYNCDSKFKIYFDTLPEKFNTGLSFSIQAITMLDGTLLLEEIMQARQHLHAQYDELFPALCNNFPDIFPPELYTWEKFLWACELWYSNSMKIMYSDGKLRTCLIPLAGFLNHSLCPHVMHYGKVDPATNSLKFCLSRPCRSGEECCLSYGNFSSSHLITFYGFLPQGDNSYDVIPLDIDGSDVDSNEDIPVSNWTTHMVRGTWLSKDHRIFNYGLPSPLLDHLRRSRSPMLRTKTFLQGSLENELEVLENLKDIFDDMMENMGKIDLDDRENCSWDEKLAMDFKDLQRRIACSVSTSCHTGMDMLKNELCKCMAEDILG 982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00599 982 MobiDBLite consensus disorder prediction 327 354 - -
Gma17g00599 982 Pfam Domain associated at C-terminal with AAA 26 118 IPR025753 -
Gma17g00599 982 Gene3D - 192 248 IPR027417 -
Gma17g00599 982 PANTHER BNAA07G01600D PROTEIN 432 978 - -
Gma17g00599 982 SUPERFAMILY SET domain 581 834 IPR046341 -
Gma17g00599 982 Coils Coil 977 982 - -
Gma17g00599 982 Pfam SET domain 607 813 IPR001214 GO:0005515
Gma17g00599 982 Coils Coil 350 370 - -
Gma17g00599 982 Gene3D set domain protein methyltransferase, domain 1 544 826 - -
Gma17g00599 982 ProSiteProfiles SET domain profile. 595 813 IPR001214 GO:0005515
Gma17g00599 982 Gene3D - 435 543 IPR036464 -
Gma17g00599 982 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 104 247 IPR027417 -
Gma17g00599 982 Coils Coil 904 924 - -
Gma17g00599 982 MobiDBLite consensus disorder prediction 326 366 - -
Gma17g00599 982 CDD SET_LSMT 597 827 - -
Gma17g00599 982 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 432 978 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00599 Gma-Chr17 5002081 5020871 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Gma17g00599 SET 7e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00599 K19199 - gmx:100778605 1115.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00599 17 5002081 5020871 Gma17g00599 17 5002081 5020871 ECH
Gma17g00599 17 5002081 5020871 Gma13g00768 13 21894077 21895838 GST