Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00580 ATGGAAGGGCAAGTAGCTAAACGCAGACGTGTATACTCCGTGGAACCGAACCAAATAGTGCAATCTATATTTACTAGGAATTATTTGAATCATTTGGTTCCAGCGTTGGTGAAGATAAAGGAAAAGAGTTCTGTGGAAGAAGATAGAAGGCATTGTGATGATATTAACAATGCTGTCAAGTATGAAGTGGACATGGCAATGGTGTTGTCAGCACAAGGATTTGCATGGAGTAACGGCCTTAAAGATAAGCTTCAAAGCGATGACGTTCATGTCAATGCAGCTAAAAGCActagctttcttgaaaatgatgaggctggtgaaggttcatcatcaaaGAATGCTTATGACAAAAATGAAGTTGTACTCCCAATGGAATATTTCTCTTCAAACCCTAGCTCAAAGTCTAAGTGCAAGGACATGTCAGAAATGAAAAGGGATTTAGCCAGAGAAGATGATGATAAGGAGGATGAGGACATCAGCAACCAGTGGAAGAAGCTGAGAAGGTTGATACCCGGAGGAGAAGAGATGTGTGATGATGAACAAATGGTTTCAGAGCTAGAGAGTTACATAAGCTGTTTGCAAATGCAGGTGAACGCTCTTCAGTTTCTGTGCCACACACGCGTTAGTTAA 630 0.3825 MEGQVAKRRRVYSVEPNQIVQSIFTRNYLNHLVPALVKIKEKSSVEEDRRHCDDINNAVKYEVDMAMVLSAQGFAWSNGLKDKLQSDDVHVNAAKSTSFLENDEAGEGSSSKNAYDKNEVVLPMEYFSSNPSSKSKCKDMSEMKRDLAREDDDKEDEDISNQWKKLRRLIPGGEEMCDDEQMVSELESYISCLQMQVNALQFLCHTRVS 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00580 209 MobiDBLite consensus disorder prediction 127 157 - -
Gma17g00580 209 MobiDBLite consensus disorder prediction 137 151 - -
Gma17g00580 209 PANTHER TRANSCRIPTION FACTOR BHLH146 2 206 - -
Gma17g00580 209 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 2 206 IPR044660 GO:0006355
Gma17g00580 209 CDD bHLH_AtIBH1_like 159 203 IPR044549 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00580 Gma-Chr17 4804608 4805237 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00580 1 84 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30180 47.674 5.74e-16 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00580 - - gmx:100813719 420.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00580 17 4804608 4805237 Gma13g00785 13 22118653 22119276 GST
Gma17g00580 17 4804608 4805237 Gma15g01515 15 14144870 14145768 PCT
Gma17g00580 17 4804608 4805237 Gma09g00507 09 5223365 5223988 PCT
Gma15g01515 15 14144870 14145768 Gma17g00580 17 4804608 4805237 PCT
Gma09g00507 09 5223365 5223988 Gma17g00580 17 4804608 4805237 PCT