Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00574 ATGCCAGTGACCTTGAAAGCTTGTTACACTGTGAAGCCTATAGAGACAACATGGTGCGGACGCGTATCTTTATCTGAATGGGATCAAACAGGAAATGTAACTCACGTCCCCATAATCTACTTCTACCGTACTCCCTCGCAAGAGAGCAACAACAACAGCATTGCTTCCACCTTGAAAGACTCATTAAGCAGAGTCCTAGTGCCATTTTATCCACTAGCCGGTCGTTTACACTGGATAAACAATGGTCGTTTAGAACTTGATTGCAACGCCATGGGAGTTCAATTCATTGAAGCTGAATCCTCATCAAGTTTTGAAGATCTCGGTGATGACTTTTCACCCTCTTCAGAATACAACTACCTTGTCCCCACTGTAGACTACACTCTCCCAATTCACGGCTTGCCCTTGGTTCTGATTCAATTAACTAACTTCAAGTGTGGTGGCGTTAGTATCGGCATAACACTTTCACACGCGGTTGTGGATGGACCAAGTGCATCACACTTTATTAGTGAGTGGGCAAGGCTTGCACGCGGCGAGCCTTTGCAAACGGTGCCGTTTCATGATCGAAAAGTGCTACATGCCGGGGACCCACCTTCGGTGCCACTAGCAAGGTGTCACTCTCACACGGAGTTTGATGAGCCTCCGTTGTTGCTCGGAAAAACGGACAACACGGAGGAAAGAAAAAAGAAGACCGCAATGGTTATCCTCAAACTGAGTAAGACACAAGTTGAGACATTGAAAAAGACAGCAAATTATGGCGGTTATGGTAATGATAGTTATAGCCGTTACGAGGCTATAGCTGGTCACATATGGAGAAGTGCATGTAAGGCAAGAGGGCACAAAGAGGACCAACCAACAACGCTTACTGTTATCGTTGACTCGAGAAGTCGAATGGAGCCTCCTTTGCCAAAAGGGTATTTTGGGAATGCAACTTTGGACACTGTTGCTACTAGCCTTGCGGGTGATTTGGTGTCAAAGCCGTTAGGGTATGCGTCAAGTAGAATAAGAGAGGCTATTGAGAGGGTTAGTGATGAGTACGTTAGGTCGGGGATTGAGTTCTTGAAAAACCAGGAGGATTTGAGAAGGTTTCATCAAGATCTTCATGCAATAGAGAGTGAGAAGAAGGAGCCTTTTTATGGGAACCCTAATCTGGCTGTGGTTAGTTGGTTGACGTTGCCGATCTATGGCGTTGATTTTGGGTGGGGGAAGGAGCTTTATATGAGTCCAGCAACGCATGACTTCGATGGAGATTTTGTGCTTCTTCCTGGTCCAGATGGGGATGGATCTTTGCTGGTTTGTTTAGGTCTGCAAGTGGAGCATATGGATGCGTTTAAGAAACATTTTTACGAGGACATTGAGTCAAAATCATGA 1368 0.4561 MPVTLKACYTVKPIETTWCGRVSLSEWDQTGNVTHVPIIYFYRTPSQESNNNSIASTLKDSLSRVLVPFYPLAGRLHWINNGRLELDCNAMGVQFIEAESSSSFEDLGDDFSPSSEYNYLVPTVDYTLPIHGLPLVLIQLTNFKCGGVSIGITLSHAVVDGPSASHFISEWARLARGEPLQTVPFHDRKVLHAGDPPSVPLARCHSHTEFDEPPLLLGKTDNTEERKKKTAMVILKLSKTQVETLKKTANYGGYGNDSYSRYEAIAGHIWRSACKARGHKEDQPTTLTVIVDSRSRMEPPLPKGYFGNATLDTVATSLAGDLVSKPLGYASSRIREAIERVSDEYVRSGIEFLKNQEDLRRFHQDLHAIESEKKEPFYGNPNLAVVSWLTLPIYGVDFGWGKELYMSPATHDFDGDFVLLPGPDGDGSLLVCLGLQVEHMDAFKKHFYEDIESKS 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00574 455 Gene3D - 218 450 IPR023213 -
Gma17g00574 455 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 5 451 - -
Gma17g00574 455 Pfam Transferase family 1 449 - -
Gma17g00574 455 Gene3D - 1 211 IPR023213 -
Gma17g00574 455 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 5 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00574 Gma-Chr17 4752029 4753437 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00574 1 449 Monolignol Biosynthesis Gene Families AT5G48930 39.866 9.08e-113 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00574 K13065 - gmx:100777532 932.169
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00574 17 4752029 4753437 Gma17g00574 17 4752029 4753437 ECH