Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00573 ATGTCATCAGTAACCTACAAAGGCTGCTACACCGTAAGGCCTATGGAACCAACAAAGTGTGAACGCGTACCTTTATCTGAATGGGATCAAATAGGCACCATAACTCACGTTCCCACAATCTACTTCTACCGTCCCACCTCACAAGACAAAGACAACGTTAACACCGTTGCTTCCACCTTGAAAGACGCATTAAGCAGAGCCCTAGTGCCGTTTTATCCACTAGCTGGTCGTTTACATTGGATAAACAAGGGTCGTTTAGAGCTTGATTGCAACGCCATGGGGGTTCATTTCATTGAAGCTGAATCCTCACTAACCCTAGAAAATCTCGGTGACTTTTCACCCTCTTCAGAATACAACAACCTTGTCCCCAACGTAGACTACACCCTCCCAATTCACGAGCTACCCGTGGTTCTCATTCAACTAACTAACTTCAAGTGTGGTGGTTTTAGCATTAGCTTAAATACTTCACATGCTGTTGCGGATGGACCAAGTGCATTGCACTTCTTGTGTGAGTGGGCAAGGCTTTCACGCGGTGAGCTTCTTCAAACGGCGCCGTTATTCGACCGGACCGTGTTTCGTGCCGGAGAGCCTCCTCTGATGCCACTAACGGAGTGTCGCGTTCACAAGGATCAGTTCATTCACCCTCCGTTGTTGCTCGGCCAAACCAACAACACAGAAGAAAGGAAGAAAAAAACCACAGTGGTTATTCTCAAACTGACCAAAACACAAGTTGAGACACTGAAAAAGACAGCGAATGAGAGTAACAGTGGTCATGCACGTTGTTACACTCGTTATGAGAGTGTGACTGGTCATGTGTGGAGAACTGCATGCAAGGCAAGAGGGCACAAAGAGGACCAACCAACCGCGCTAGGTGTTTGTGTTGACTCGAGGAGTCGCATGGAACCTCCTTTGCCAAAAGGATATTTTGGGAATGCAACTTTGGACACTGTTGCTACTAGCCTTGCTGGTGATTTGGTGTCAAAGCCATTAGGGTATGCGTGTAGTAGAATAAGAGAGGCGATTGAGAGGGTTACTGATGAGTACGTTAGGACGGGGATTGAGTTCTTGAAGAATCAAGAGGATTTGAGTAGGTTTCAAGATCTATATGCAATAGGGAGTGAGAAGGGTCCTTTCTATGGGAACCCTAATCTTGGTGTGGTTAGTTGGTTAACGTTGCCTATCTATGGCGTTGATTTTGGGTGGGGGAAGGAGGTTTATATGGGTCCGGGGACACATGACTTCGATGGAGATTCTTTGCTTCTTCCTGGTCCAGATGGGGAGGGGTCTGTGCTGCTTGCTTTGTGTCTTCAAGTGCCGCATATGGATACGTTTAAGAAGCATTTTTATCAAGACATTAATGTGTCAGAATCATGCCAAGATTGA 1383 0.4642 MSSVTYKGCYTVRPMEPTKCERVPLSEWDQIGTITHVPTIYFYRPTSQDKDNVNTVASTLKDALSRALVPFYPLAGRLHWINKGRLELDCNAMGVHFIEAESSLTLENLGDFSPSSEYNNLVPNVDYTLPIHELPVVLIQLTNFKCGGFSISLNTSHAVADGPSALHFLCEWARLSRGELLQTAPLFDRTVFRAGEPPLMPLTECRVHKDQFIHPPLLLGQTNNTEERKKKTTVVILKLTKTQVETLKKTANESNSGHARCYTRYESVTGHVWRTACKARGHKEDQPTALGVCVDSRSRMEPPLPKGYFGNATLDTVATSLAGDLVSKPLGYACSRIREAIERVTDEYVRTGIEFLKNQEDLSRFQDLYAIGSEKGPFYGNPNLGVVSWLTLPIYGVDFGWGKEVYMGPGTHDFDGDSLLLPGPDGEGSVLLALCLQVPHMDTFKKHFYQDINVSESCQD 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00573 460 Gene3D - 221 451 IPR023213 -
Gma17g00573 460 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 6 452 - -
Gma17g00573 460 Pfam Transferase family 3 450 - -
Gma17g00573 460 Gene3D - 3 208 IPR023213 -
Gma17g00573 460 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 6 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00573 Gma-Chr17 4748904 4750286 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00573 4 450 Monolignol Biosynthesis Gene Families AT5G48930 39.150 1.20e-113 339
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00573 K13065 - gmx:100777007 932.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00573 17 4748904 4750286 Gma17g00573 17 4748904 4750286 ECH