Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00562 ATGAGATTGTTGGAGTTTGGGTGTGTGTTGATTGTTCTATCTGCACTTCTGGTTTCTGGGGATGCTGAGGTTTACATAGTAACTGTTGAAGGTGAGCCTATCATAAGTTATACTGGAGGTATTGATGGGTTTAAAGCTACTGCTGTGGAATCTGATGAGGAGATTGATACCACAAGTGAATTGGTTACTTCTTATGCTCGCCATCTTGAGAAAAAACATGACATGCTGCTGGGTTTGCTGTTTGAGGAAGGGACATACCAGAAACTTTATAGCTATCGACATCTTATAAATGGGTTTGCTGTTCATATTTCACCAGAACAGGCAGAAACTCTAAGACATGCTCCTGGAGTGAAATCTGTTGAGAGGGACTGGAAAGTGAAGAGACTTACAACACATACCCCACAATTTTTAGGGCTTCCAACTGGGGTTTGGCCAACAGGAGGTGGCTTTGATCGGGCTGGAGAAGACATTGTGATTGGACTTGTGGACACAGGGATCTATCCTCAGCACCCAAGTTTTGCAACTCATAATTCTGAGCCATATGGGCCAGTTCCAAAGTACAGAGGAAAATGTGAAGCTGATCCAGAAACTAAAAGAAGTTACTGTAATGGGAAGATTGTTGGAGCACAACACTTTGCTCATGCTGCAATAGCTGCTGGGTCATTTAACCCTTCAATTGACTTTGCTTCTCCTCTTGATGGAGATGGACATGGAAGTCATACAGCCTCTATTGCGGCCGGAAATAATGGAATTCCTGTGAGGATGAATGGCCATGAATTCGGGAGAGCGAGTGGGATGGCTCCTCGTGCTAGGATTGCTGTCTACAAGGCAATTTATAGACTGTTTGGAGGGTTTGTTGCAGATGTAGTTGCTGCAATTGATCAGGCTGTATATGATGGAGTGGATATACTCAACCTTTCAGTTGGACCCGACAGTCCTCCAGCAGCCACCAAAACTACATTTTTGAACCCTTTTGATGCCACACTTCTTGGAGCCGTGAAAGCTGGTGTATTTGTTGCACAGGCTGCTGGAAATCATGGTCCTCTTCCTAAGACATTGGTTTCATATAGTCCATGGATAGCATCTGTAGCAGCTGCAATTGATGATCGTAGATATAAAAATCATTTGATCCTTGGAAATGGAAAAACCTTAGCAGGAATTGGGTTATCACCTTCCACACATTTAAACGAAACATACACATTGGTTGCCGCAAATGATGTGTTGCTAGATTCTTCACTTATGAAGTATAGCCCCACGGATTGCCAGAGACCAGAACTTTTAAATAAGAATTTAATAAAGGGAAATATTCTTCTCTGTGGATATTCCTTCAACTTTGTTGTTGGCACTGCATCGATCAAGAAAGTCTCAGAAACAGCAAAGGCCCTTGGTGCAGTTGGATTTGTTCTTTGTGTTGAAAACATTTCCCTAGGAACAAAATTTAATCCAGTTCCTGTTGGCCTTCCTGGGATTCTCATCATAGATGTCAGCAATTCAAAGGAACTGATAGATTATTATAATATCACTACACCAAGAGACTGGACTGGGCGTGTAAAGAGTTTCGAAGGTAAAGGTAAAATCGGTGATGGTTTGATGCCTATTCTGCATAAATCTGCACCACAGGTAGCATTATTCTCTGCTCGAGGGCCAAATATAAAGGACTTCAGCTTCCAAGAGGCAGATCTTCTCAAACCAGATATATTAGCTCCTGGTTCATTGATTTGGGCTGCTTGGTGTCCAAATGGAACTGATGAGCCAAATTATGTTGGTGAAGCGTTTGCCATGATATCTGGAACCAGCATGGCTGCACCACATATAGCTGGAATTGCTGCTCTTATAAAGCAGAAGCATCCTCATTGGAGCCCTGCAGCCATTAAATCAGCTTTGATGACTACATCAACGACTCTAGACAGAGCAGGGGATCCTCTTCTAGCCCAGCAAACTTCTGAATCAGAAGCTATGAGGCTGGTCAAAGCTACTCCTTTTGATTATGGGAGTGGTCATGTTGATCCAACTGCTGCATTGGACCCTGGGCTCATCTTTGATGCAGGGTACGAGGATTATATAGGCTTCTTGTGCACAACACCTAGCATTGATGTTCATGAGATAAGGAACTACACTCACACCCCATGTAACACCTCCATGGGCAAACCATCAAATTTAAACACCCCATCAATAACAATTTCCCATCTTGTGAGAACTCAAGTTGTCACGCGCACGGTCACAAATGTTGCCGAGGAAGAAACCTATGTGATCACAGCCAGAATGGAACCGGCTGTTGCCATTGAAGTCAACCCTCCAGCAATGACTATCAAAGCAGGCGCATCGCGCCAGTTTTTGGTGTCACTTACAGTGCGCTCGGTGACAGGAAGGTATAGTTTTGGAGAGGTTTTGATGAAAGGGAGCAGAGGGCACAAGATTAGAGTACATAGTTTTTGTCACACCTCACTTCTCTCCGATTTGCGCTTGTTCTTCTTCTTGGTCAACTCGATCGTAAGTCGTAGAACTAGAAGGGTGAGGGCAATATGGAGAGCCCCCCATCTCCTACATCGCTTGTTAAGTTTACTCAAGAACGTGCGGCCAGGATCAGATCTCACAAACTTCCAACTGCCGCCTGTGTTTAATTTCCCAAAATCTCAACTTCAATGCTATGGTGAATCAGTGTACTGCACATCTTCCAACTTGCTAAGCCAATGCAACAGTGGGCAGAGTCCACTGGACAGGTTCACATCAGTAGTAGCATGGAGCATATCTACCACACGCCCCACATCTTTTGGTGTTGCTCCTTATAATTCCACTCTTGGAGAGACCCACCATGTTTCCAAGGGCAATCTCAACGTCCTAGTTGAGCAGGTTTCACTCAATCCTCCAGTATCTGCCCTCCATGCAACAGATGAGAAGGAAAACATTGAGATGATATGGTGCCAGCAGCCTGTTCCAAAGTTTCGGGGTACATCTATTGAAGCTCAAGTGCATGGTAAACGGCTGCTGAAGCTCCAAAATCATGGAGAAACATATGAAATGAATTCTCCTCACCTTTCAATTAGAATTCTTCCGGTTCCTGGGATTGATTGGGTTGGCAATGTTAATATAAGGTGCCCAGAGACAGGTCTGGTAGCTGAAATATCATACAGATCAAGCCATTCTTTTTTAGGATTTGGGGGAAGTCGTAAATTGATCAAAGGGAAAATCCTTGACTCATCATTACTCAAAGTTCTCTTCGAAGTTGATGGTCATTGGGATAAGATAGTTAGAGTGAAGGATACAAATAGTGGAGAAGTGAGAGTGATATATGATGCCAAAGAAGCCATTTCAGGTCTCAAAACTCCTATTATCAAGGATGTGGAGAGTGTGTGGCCAACCGAATCAGCCCTTGTTTGGAGTGAGTTGAGCCAAGCCATTATGAACAAAGATTGGGAAAGAGCAAGAGAAGCAAAGCAAGACGTGGAAGAAAGACAGAGGAATATGTTGAGAGACAGAGCCATGAAAGGAGAAACTTGGTTTCCTAAGAATTTTAGGGTGTCTTACAGTAAAGACACATGGGAATGGGACTGTTCACCAACTCATAAATGGGTCCCTGAGGCCCCCATCATAGCTCAATAA 3600 0.4375 MRLLEFGCVLIVLSALLVSGDAEVYIVTVEGEPIISYTGGIDGFKATAVESDEEIDTTSELVTSYARHLEKKHDMLLGLLFEEGTYQKLYSYRHLINGFAVHISPEQAETLRHAPGVKSVERDWKVKRLTTHTPQFLGLPTGVWPTGGGFDRAGEDIVIGLVDTGIYPQHPSFATHNSEPYGPVPKYRGKCEADPETKRSYCNGKIVGAQHFAHAAIAAGSFNPSIDFASPLDGDGHGSHTASIAAGNNGIPVRMNGHEFGRASGMAPRARIAVYKAIYRLFGGFVADVVAAIDQAVYDGVDILNLSVGPDSPPAATKTTFLNPFDATLLGAVKAGVFVAQAAGNHGPLPKTLVSYSPWIASVAAAIDDRRYKNHLILGNGKTLAGIGLSPSTHLNETYTLVAANDVLLDSSLMKYSPTDCQRPELLNKNLIKGNILLCGYSFNFVVGTASIKKVSETAKALGAVGFVLCVENISLGTKFNPVPVGLPGILIIDVSNSKELIDYYNITTPRDWTGRVKSFEGKGKIGDGLMPILHKSAPQVALFSARGPNIKDFSFQEADLLKPDILAPGSLIWAAWCPNGTDEPNYVGEAFAMISGTSMAAPHIAGIAALIKQKHPHWSPAAIKSALMTTSTTLDRAGDPLLAQQTSESEAMRLVKATPFDYGSGHVDPTAALDPGLIFDAGYEDYIGFLCTTPSIDVHEIRNYTHTPCNTSMGKPSNLNTPSITISHLVRTQVVTRTVTNVAEEETYVITARMEPAVAIEVNPPAMTIKAGASRQFLVSLTVRSVTGRYSFGEVLMKGSRGHKIRVHSFCHTSLLSDLRLFFFLVNSIVSRRTRRVRAIWRAPHLLHRLLSLLKNVRPGSDLTNFQLPPVFNFPKSQLQCYGESVYCTSSNLLSQCNSGQSPLDRFTSVVAWSISTTRPTSFGVAPYNSTLGETHHVSKGNLNVLVEQVSLNPPVSALHATDEKENIEMIWCQQPVPKFRGTSIEAQVHGKRLLKLQNHGETYEMNSPHLSIRILPVPGIDWVGNVNIRCPETGLVAEISYRSSHSFLGFGGSRKLIKGKILDSSLLKVLFEVDGHWDKIVRVKDTNSGEVRVIYDAKEAISGLKTPIIKDVESVWPTESALVWSELSQAIMNKDWERAREAKQDVEERQRNMLRDRAMKGETWFPKNFRVSYSKDTWEWDCSPTHKWVPEAPIIAQ 1199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00562 1199 ProSiteProfiles Serine proteases, subtilase domain profile. 123 674 - -
Gma17g00562 1199 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 14 803 IPR045051 -
Gma17g00562 1199 Pfam Peptidase inhibitor I9 24 127 IPR010259 -
Gma17g00562 1199 Gene3D Peptidase S8/S53 domain 156 687 IPR036852 GO:0004252|GO:0006508
Gma17g00562 1199 SUPERFAMILY Subtilisin-like 129 678 IPR036852 GO:0004252|GO:0006508
Gma17g00562 1199 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 159 170 IPR023827 -
Gma17g00562 1199 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 128 IPR037045 -
Gma17g00562 1199 CDD PA_subtilisin_like 376 514 - -
Gma17g00562 1199 PRINTS Subtilisin serine protease family (S8) signature 233 246 IPR015500 -
Gma17g00562 1199 PRINTS Subtilisin serine protease family (S8) signature 596 612 IPR015500 -
Gma17g00562 1199 PRINTS Subtilisin serine protease family (S8) signature 154 173 IPR015500 -
Gma17g00562 1199 Pfam Oxysterol-binding protein 853 1181 IPR000648 GO:0008289
Gma17g00562 1199 Gene3D - 369 534 - -
Gma17g00562 1199 Pfam Subtilase family 154 637 IPR000209 GO:0006508|GO:0008236
Gma17g00562 1199 SUPERFAMILY Oxysterol-binding protein-like 850 1183 IPR037239 -
Gma17g00562 1199 Gene3D - 691 813 - -
Gma17g00562 1199 Gene3D - 1115 1163 - -
Gma17g00562 1199 PANTHER CUCUMISIN-RELATED 14 803 - -
Gma17g00562 1199 CDD Peptidases_S8_3 130 633 IPR034197 -
Gma17g00562 1199 ProSitePatterns Serine proteases, subtilase family, serine active site. 597 607 IPR023828 -
Gma17g00562 1199 Gene3D - 929 1114 - -
Gma17g00562 1199 SUPERFAMILY Protease propeptides/inhibitors 86 126 - -
Gma17g00562 1199 Pfam Fibronectin type-III domain 719 807 IPR041469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00562 Gma-Chr17 4633757 4647542 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00562 4 806 Subtilisin-like Serine Gene Family AT4G30020 79.006 0.0 1329
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00562 - - gmx:100776104 1584.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00562 17 4633757 4647542 Gma17g00562 17 4633757 4647542 ECH