Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00501 ATGAATGAGATTCGAATGGCTGCTTCTTTGCTTCGCCTTCACTTTCATGATTGCTTTGTGAATggttgtgatggatcgatactactagatggtggtgatgatggagagaaatctgctgctcctaacctgaactctgctagaggatatgaggttgtagatacaatcaaaagttcagtggagagtgcatgtagtggggttgtctcctgtgctgatatattagccattgctgccagagattctgttTTCCTAAGTGGTGGTCCTTTTTGGAAGGTTCCGCTAGGACGAAGAGATGGAACAGTCTCAAACGGAACACTGGCAACTGAGGTGCTTCCAGCGCCATTTGATCCATTGAATACCATCATTTCAAAGTTTACTAATATGGGCCTTAATCTCACTGACGTTGTTTCTTTATCAGGTGCCCATACAATTGGCCGAGCAAGGTGTACACTGTTTAGCAATAGATTATTCAACTTCTCAGGAACAGGTGCACCAGACAGCACACTAGAAACTGGCATGCTCTCTGACCTGCAAAGTTTGTGTCCTCAAAATGGAGATGGAAATGTTACTACAGTCCTTGATCGGAATTCATCGGATCTATTTGACATTCACTACTTCAAGAACCTGCTCAGTGGAAAGGGGCTTCTCAGTTCTGACCAGATTCTATTTTCTAGTGATGAAGCTAATTCAACAACAAAACCTTtagtccaaagctatagcaacgatagtggacaattctttggggactttgccaactctatgatcaagatggggaatataaatattaagactgggactgatggagagattaggaaaaactgcagAGTGATAAATTCTCAGTAA 840 0.269 MNEIRMAASLLRLHFHDCFVNGCDGSILLDGGDDGEKSAAPNLNSARGYEVVDTIKSSVESACSGVVSCADILAIAARDSVFLSGGPFWKVPLGRRDGTVSNGTLATEVLPAPFDPLNTIISKFTNMGLNLTDVVSLSGAHTIGRARCTLFSNRLFNFSGTGAPDSTLETGMLSDLQSLCPQNGDGNVTTVLDRNSSDLFDIHYFKNLLSGKGLLSSDQILFSSDEANSTTKPLVQSYSNDSGQFFGDFANSMIKMGNINIKTGTDGEIRKNCRVINSQ 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00501 279 ProSitePatterns Peroxidases active site signature. 7 18 IPR019794 GO:0004601
Gma17g00501 279 PRINTS Plant peroxidase signature 9 29 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma17g00501 279 PRINTS Plant peroxidase signature 47 60 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma17g00501 279 PRINTS Plant peroxidase signature 66 76 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma17g00501 279 PRINTS Plant peroxidase signature 85 100 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma17g00501 279 PRINTS Plant peroxidase signature 132 144 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma17g00501 279 PRINTS Plant peroxidase signature 191 206 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma17g00501 279 PRINTS Plant peroxidase signature 207 224 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma17g00501 279 PRINTS Plant peroxidase signature 251 264 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma17g00501 279 PANTHER PEROXIDASE 59 2 276 - -
Gma17g00501 279 Gene3D Peroxidase, domain 2 111 256 - -
Gma17g00501 279 CDD secretory_peroxidase 2 276 IPR033905 GO:0004601|GO:0042744
Gma17g00501 279 Gene3D - 2 277 - -
Gma17g00501 279 Pfam Peroxidase 3 241 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma17g00501 279 ProSiteProfiles Plant heme peroxidase family profile. 1 277 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma17g00501 279 ProSitePatterns Peroxidases proximal heme-ligand signature. 133 143 IPR019793 -
Gma17g00501 279 PANTHER PEROXIDASE 72-RELATED 2 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma17g00501 279 PRINTS Haem peroxidase superfamily signature 7 21 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma17g00501 279 PRINTS Haem peroxidase superfamily signature 67 84 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma17g00501 279 PRINTS Haem peroxidase superfamily signature 85 97 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma17g00501 279 PRINTS Haem peroxidase superfamily signature 133 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma17g00501 279 PRINTS Haem peroxidase superfamily signature 193 208 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma17g00501 279 SUPERFAMILY Heme-dependent peroxidases 2 277 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00501 Gma-Chr17 4111982 4114975 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00501 3 277 Peroxidase AT5G19890 66.182 1.06e-131 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00501 K00430 - gmx:100817622 537.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00501 17 4111982 4114975 Gma13g00864 13 22863513 22866677 GST