Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00479 ATGGAACTGAACTTCTCCATGCTTATCCCTTCCTACTCAGATGTCTTTATTGGTGGACCCATTTTGTTTATTTTGCATTTTGAAGGAGTGGACCTTTTCCTCCTCCTGGCTGTGATTCTATATTGGATTGTTTGGTACAAAGATCCTGTCTTATTGAAGTTTCACCTGCCAACAGAAATGGGTGATTTCCAAGGCCCCTTCATAGTGTCACCCCCTCCTTCACTCTCTTCCTCGGATAAATCCAGCACAACCATGCTATACTATGGGCTAGTAGTGGTGGGGATTGCAGCCATGGCATTAGCCCTATATAACTTCATCATCATCAAACGAAGTAGAAGGCGCCATATGCAATCACAGGCTGCAGGGGCAAATGGGTTGGTGGAGGGGGCGGTGATGGAAAGTAGTGGAACTGAGAACTGCCAAAGGAACAACTTCAACATGCTCTCAAGCTTCAAGTACAAGAAAGAAGGAATTGGAAATGATGGTGATTATGATTATgaatgcccagtttgcttatcgggttttgaagaagTGGTGGTGGTGGCGGTGGCGGTGGCGTCTCGGTAG 567 0.4339 MELNFSMLIPSYSDVFIGGPILFILHFEGVDLFLLLAVILYWIVWYKDPVLLKFHLPTEMGDFQGPFIVSPPPSLSSSDKSSTTMLYYGLVVVGIAAMALALYNFIIIKRSRRRHMQSQAAGANGLVEGAVMESSGTENCQRNNFNMLSSFKYKKEGIGNDGDYDYECPVCLSGFEEVVVVAVAVASR 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00479 188 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 70 177 IPR044675 -
Gma17g00479 188 PANTHER RING-H2 FINGER PROTEIN ATL52-LIKE 70 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00479 Gma-Chr17 3941263 3947833 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00479 - - gmx:102668514 224.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00479 17 3941263 3947833 Gma13g00887 13 23079605 23080948 GST
Gma17g00479 17 3941263 3947833 Gma15g01626 15 16204508 16205083 PCT
Gma15g01626 15 16204508 16205083 Gma17g00479 17 3941263 3947833 PCT