Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00451 ATGGCCGCTGTTCGCCTCCTTCTCTTCCACCTCCTCCTCCTCCTCCTCCTCTTCCCTTTCTCCTCTTTCTCCCTCTCCGAAAACGAAGCCCTTCTCAACCTCAAGAAATCATTCTCCAACCCCGTTGCTCTCTCTTCCTGGGTCCCCAACCAGAGCCCTTGCTCCTCCCGGTGGCTCGGCGTCATCTGCTTCAACAACATCGTCAGCAGCCTCCACCTCGCCGACCTCTCCCTCTCCGGCACCATCGACGTCGACGCCCTCACCCAAATCCCCACTCTCCGTTCAATCAGCTTCATCAACAACTCCTTCTCCGGCCCGATCCCTCCCTTCAACAAACTCGGAGCCCTCAAGGCCCTCTACTTAGCCCGCAACCATTTCTCCGGCCAAATCCCCTCCGATTTCTTCTCCCAATTAGCTTCCCTGAAAAAAATATGGATCTCCGACAACAATTTCTCCGGCCCCATCCCCTCTTCCTTAACCAACCTCCGCTTCCTCACCGAACTCCACCTCGAGAACAACCAGTTCTCTGGCCCGGTCCCGGAGCTCAAGCAAGGCATAAAATCCTTGGACATGTCGAACAACAAGCTCCAGGGAGAAATCCCCGCCGCCATGTCGCGGTTCGACGCGAATTCCTTCTCCAACAACGAAGGGCTCTGCGGGAAGCCTTTGATTAAAGAGTGTGAGGCCGGTAGTTCAGAAGGGTCGGGTTGGGGGATGAAGATGGTTATTATCCTCATTGCCGCTGTTGCTTTGGCGATGATTTTTGTGTTGATGCGGTCGAAGCGTCGACGCGACGATGACTTCAGCGTGATGAGCAGGGATCACGTGGACGAGGTGGTGCAAGTGCACGTGCCGAGCTCGAACCATAGCAGGGCCTCCGAGAGGGGGAGCAAGAAGGAGTTTACTTCGTCGAAGAAAGGGTCGTCGCGTGGCGGCATGGGTGACCTTGTGATGGTGAACGACGAGAAGGGCGTGTTTGGGTTGCCCGATTTGATGAAGGCTGCCGCGGAGGTTCTCGGGAACGGTGGGTTGGGTTCGGCCTACAAAGCTGCCATGAACAATGGCCTCTCTGTGGTGGTCAAGAGGATGCGCGAGATGAATAAAGTCAGCAGAGACATCTTTGACGCCGAGATGAGACGCTTTGGAAGACTCAGAAACCCTAACATCATTACGCCTCTCGCTTACCATTACCGCAAGGAGGAAAAGCTGTTTGTCACTGAATACATGCCCAAAGGAAGCTTGCTATACGTCTTGCATGGTGACAGAGGATCGAGTCATGCCGACCTGAACTGGCCAATGCGTTTGAATATCGTGAAGGGAATTGCACGAGGGTTGGGTTTTATTTATTCTGAATTTCCTAACGAAGTGCTGCCACATGGAAACCTGAAATCCAGTAATGTTCTACTAACTGAAAATTACGAGCCTCTCCTAAGCGACTTCGCCTTTCATCCACTCATCAACCCCAACTACGCCATACAGACAATGTTTGCCTACAAAACACCCGATTACGTGTCATACCAGCATGTTTCACAGAAGACCGACGTGTATTGCCTCGGAATCATCGTTCTTGAAATCATCACTGGGAAATTCCCCTCTCAGTATCACAGTAATGGCAAGGGTGGGACTGACGTAGTGCACTGGGTGTTCACTGCGATTTCTGAGAGAAGAGAAGCGGAATTGATTGATCCAGAGTTGATGAGCAATCACTCCAACTCCCTCAATCAAATGCTGCAACTTCTCCAAGTAGGGGCTGCTTGCACGGAGAGCAACCCCGACCAACGACTTAACATGAAGGAAGCCATTAGAAGGATAGAGGAGGTTCAGGTTTAA 1830 0.524 MAAVRLLLFHLLLLLLLFPFSSFSLSENEALLNLKKSFSNPVALSSWVPNQSPCSSRWLGVICFNNIVSSLHLADLSLSGTIDVDALTQIPTLRSISFINNSFSGPIPPFNKLGALKALYLARNHFSGQIPSDFFSQLASLKKIWISDNNFSGPIPSSLTNLRFLTELHLENNQFSGPVPELKQGIKSLDMSNNKLQGEIPAAMSRFDANSFSNNEGLCGKPLIKECEAGSSEGSGWGMKMVIILIAAVALAMIFVLMRSKRRRDDDFSVMSRDHVDEVVQVHVPSSNHSRASERGSKKEFTSSKKGSSRGGMGDLVMVNDEKGVFGLPDLMKAAAEVLGNGGLGSAYKAAMNNGLSVVVKRMREMNKVSRDIFDAEMRRFGRLRNPNIITPLAYHYRKEEKLFVTEYMPKGSLLYVLHGDRGSSHADLNWPMRLNIVKGIARGLGFIYSEFPNEVLPHGNLKSSNVLLTENYEPLLSDFAFHPLINPNYAIQTMFAYKTPDYVSYQHVSQKTDVYCLGIIVLEIITGKFPSQYHSNGKGGTDVVHWVFTAISERREAELIDPELMSNHSNSLNQMLQLLQVGAACTESNPDQRLNMKEAIRRIEEVQV 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00451 609 Gene3D Phosphorylase Kinase; domain 1 339 409 - -
Gma17g00451 609 Pfam Protein kinase domain 337 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma17g00451 609 SUPERFAMILY L domain-like 24 207 - -
Gma17g00451 609 Gene3D Ribonuclease Inhibitor 186 224 IPR032675 -
Gma17g00451 609 Gene3D Ribonuclease Inhibitor 135 184 IPR032675 -
Gma17g00451 609 Gene3D Ribonuclease Inhibitor 26 134 IPR032675 -
Gma17g00451 609 Pfam Leucine rich repeat 116 175 IPR001611 GO:0005515
Gma17g00451 609 Pfam Leucine rich repeat N-terminal domain 26 63 IPR013210 -
Gma17g00451 609 SUPERFAMILY Protein kinase-like (PK-like) 337 604 IPR011009 -
Gma17g00451 609 Coils Coil 597 609 - -
Gma17g00451 609 MobiDBLite consensus disorder prediction 284 313 - -
Gma17g00451 609 PANTHER LRR RECEPTOR-LIKE KINASE 10 609 - -
Gma17g00451 609 Gene3D Transferase(Phosphotransferase) domain 1 410 609 - -
Gma17g00451 609 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 10 609 - -
Gma17g00451 609 ProSiteProfiles Protein kinase domain profile. 333 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00451 Gma-Chr17 3704474 3706915 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00451 1 609 Receptor kinase-like Gene Family AT3G42880 51.962 0.0 631
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gma17g00451 Pkinase 1.6e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00451 - - gmx:100816925 1159.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00451 17 3704474 3706915 Gma17g00451 17 3704474 3706915 ECH
Gma17g00451 17 3704474 3706915 Gma13g00918 13 23326800 23329243 GST
Gma17g00451 17 3704474 3706915 Gma15g01676 15 17461134 17464031 PCT
Gma15g01676 15 17461134 17464031 Gma17g00451 17 3704474 3706915 PCT