Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00433 ATGGAAGATGCTGGAGGTTCCAAATTGCATGGAATTAAGCAGATTGTGAGATTGAAGGAAATATTTCAGAAGTGGCAAACTGTAACTCTGGGCTCAAAAGATTCCAACAATCATTCTGATGTGACTCGTCATCATGGGGGCATATCACCAATGATTAACAAAAGGCTAACAAATATTGTGTATTGTGACTCTGATGAGGATGGTTGCTACAGCCCTCAACCACCACATGATGTTCccaaagggtacttagccgtctatgttgggcctgagcttcggaggtttatcattcccacaacctaccttagccaccctttgttcaaggttttgctggaaaaagctgcagaggaatttgggtttgatcagagtggtggactcaccattccatgTGAAATTGAGACCTTTAAATACCTCTTGAATTGCATAGAGAACCATGATGACAGCTCCACTGGAAACACAGGAACTGTGGAAGAATAA 474 0.2743 MEDAGGSKLHGIKQIVRLKEIFQKWQTVTLGSKDSNNHSDVTRHHGGISPMINKRLTNIVYCDSDEDGCYSPQPPHDVPKGYLAVYVGPELRRFIIPTTYLSHPLFKVLLEKAAEEFGFDQSGGLTIPCEIETFKYLLNCIENHDDSSTGNTGTVEE 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00433 157 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 7 152 IPR003676 GO:0009733
Gma17g00433 157 Pfam Auxin responsive protein 69 141 IPR003676 GO:0009733
Gma17g00433 157 PANTHER SMALL AUXIN-UP RNA-RELATED 7 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00433 Gma-Chr17 3528726 3530720 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00433 1 157 Calmodulin-binding Proteins AT3G43120 66.875 4.03e-74 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00433 K14488 - gmx:100795275 330.872
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00433 17 3528726 3530720 Gma17g00433 17 3528726 3530720 ECH
Gma17g00433 17 3528726 3530720 Gma13g00936 13 23508758 23509868 GST
Gma17g00433 17 3528726 3530720 Gma15g01702 15 18191883 18195068 PCT
Gma17g00433 17 3528726 3530720 Gma09g00671 09 7864847 7868688 PCT
Gma15g01702 15 18191883 18195068 Gma17g00433 17 3528726 3530720 PCT
Gma09g00671 09 7864847 7868688 Gma17g00433 17 3528726 3530720 PCT