Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00424 ATGGCATCGTTAGAGAATGAACCTTGTCACACTCCTTCTGCCTCTGACCAATCCCCTTTTTCTCCTCCTCCTCCTCCTCCTTCCAATGTCTGTATGCAGAAATTTAGGCTATATGAGACTCGATCGAACTTTTACATGATAGGAAGGGACAAGAGCAGAACATATTGGAAAGTACTAAAGATTGACCGTCTCGATCCTTCTGAGCTAAATTTGCGTGAAGATTCCACCACATATACAGAAAGTGAATGCTCTGATCTTTTGAGACGGATACATGAGGGTAACAAGTCCACTGGTGGACTAAAATTTGTTACAACTTGTTATGGAATTGTAGGGTTCATCAAATTTTTGGGGCCTTACTACATGCTGCTTATCACAAAAAGAAGGCAAATTGGTGCAATCTGTGGTCATACAGTATATGCTGTCTCAAAGAGCGAGATGATTCCATTGCCAAATTCTTCAGTTCGGTCTAACATCAATTTTAAAAATGAAAACAGGTACAAGAGGCTCCTATGCATGGTCGACCTTACAAAGGACTTTTTTTTCAGCTATTCATACCAAATTATGCGTAGTCTTCAAAGGAACATGTGTGATAATGAGACAGGCCATGTTCTTTATGAGACCATGTTTGTTTGGAATGAGTTCTTAACTCGAGGAATTAGGAATCACCTCCAGAATACTATTTGGACAGTTGCGCTAGTGTATGGATTTTTTAAACAGGAAATGCTAATGATATCCAGACGGGAGTTCACACTTACGCTCATTGCAAGACGATCACGTCATTATGCTGGCACTAGGTATTTGAGGCGTGGTGTTAATGAGAAAGGAAGAGTAGCAAATGACGTTGAGACAGAACAAATAGTCTTTGAGGATGTTGCAGAAGGTCTTCCCATCCAAATAAGCTCTATCATCCAGAACCGTGGTTCAATCCCTCTTTTCTGGTCACAGGAAACTTCAAAACTAAATATTAAACCAGATATTATATTGTCAAAAAAGGATCAGAGTTATCAAGCCACTAGATATCACTTTGAAAACCTTGTCAAAAGATATGGAAATCCCATAATTATTTTGAATTTAATAAAGACCCATGAGAAGAAGCCTCGCGAGTCCATACTTCGTCAAGAGTTTGCTAATGCCATAGATTTCATTAATAAAGATTTATCGGACGAAAACAGGCTTAGGTTCCTTCATTGGGATCTGCACAAACATTTTCAGAGCAAAGCTACAAATGTCTTGCAGCTTCTCGGCAAAGTGGCTGCATATGCATTGACATTAACAGGGTTTTTCTATTGCCAAACAACACCAACCTTGAGACCAGAAGAATGTCTGAAATGGCCAAGTACCAACAATGTTGATAAGGGAACCTTTTCACCTACTAGACATGTCAATGATGACAACAGGGTTGACAACAGGGATGCAGATGAAAATTATTCTGTCAAACCACCCATGTTGCAGAGGGGGGTGCTCAGGACCAACTGCATAGACTGCTTGGATCGCACAAATGTTGCACAATATGCATATGGGTTGGCTGCTCTTGGCCACCAGCTCCATGCTCTGGGGGTTATTGACCACCCAAAAATTGATCTTGATGAGCCTGTAGCAGATGATTTGATGGGGTTTTATGAGCGGATGGGTGATACACTTGCACATCAGTATGGTGGTTCTGCTGCACACAACAAGATTTTCTCTGAGAGGAGGGGCCAGTGGAGAGCTGCAACACAGTCTCAGGAGTTTTTTAGGACTCTTCAACGCTATTATAGCAATGCATACATGGATGCTATGAAACAGGATGCAATCAATGTATTCCTGGGGCATTTTCAGCCACAACAGGGCAAGCCTGCTCTATGGGAGTTGGGTTCAGATCAGCTCTATGATGCAGGAAGACATGGAGATGATGATGCAAGGTCATTTTTCAAAAGATCCTTCTCAGATGGAAACATTCTTAATGAAAGTTCTACACCGATGTCAGCCCCAAAGGCCAAGCACGAAAAATTCCCAAGCCAAGGCGGCTTACCAGATCGATCAGAAGAAGGAAGCAAGGGTCTTTGTGAGTCATCACCAGAAATATCCACTACTGACAGTGACATCTCATTTTCAAGGTACACTCCCTCAATGCCTCGGAGACAGCTCTTTGGAGATATGCAAAGAGAGCGCTGCCTTGAAAGTGAACATATTTACTATTCTGATCACGGGGATTCCTTCAGCTGCTCCAACTTTGTTGACCTGGATTGGCTCTCTTCTTCAGGAAATTCATGCGAAGAAGAGCCATTCGAGAGGTCATCAATTACCAACTCTCCAATTGCTGGAGTTTCTTCAGAAAATGTTATCAATGGAATGATGGTAGGTGAGGCAACTGCCTCCACTAGTGATTGGGGGGCCTCCAGCCTAAAGGGAAGGGAACAAACTGAATCCGAGTTATCTTACGATGATGCACGGTCCAACACACCAGAAGAATTTCCAGATACTTTTGTGAACTGGGTGACTTATGGACAAACACTTTGCCATTGA 2505 0.4232 MASLENEPCHTPSASDQSPFSPPPPPPSNVCMQKFRLYETRSNFYMIGRDKSRTYWKVLKIDRLDPSELNLREDSTTYTESECSDLLRRIHEGNKSTGGLKFVTTCYGIVGFIKFLGPYYMLLITKRRQIGAICGHTVYAVSKSEMIPLPNSSVRSNINFKNENRYKRLLCMVDLTKDFFFSYSYQIMRSLQRNMCDNETGHVLYETMFVWNEFLTRGIRNHLQNTIWTVALVYGFFKQEMLMISRREFTLTLIARRSRHYAGTRYLRRGVNEKGRVANDVETEQIVFEDVAEGLPIQISSIIQNRGSIPLFWSQETSKLNIKPDIILSKKDQSYQATRYHFENLVKRYGNPIIILNLIKTHEKKPRESILRQEFANAIDFINKDLSDENRLRFLHWDLHKHFQSKATNVLQLLGKVAAYALTLTGFFYCQTTPTLRPEECLKWPSTNNVDKGTFSPTRHVNDDNRVDNRDADENYSVKPPMLQRGVLRTNCIDCLDRTNVAQYAYGLAALGHQLHALGVIDHPKIDLDEPVADDLMGFYERMGDTLAHQYGGSAAHNKIFSERRGQWRAATQSQEFFRTLQRYYSNAYMDAMKQDAINVFLGHFQPQQGKPALWELGSDQLYDAGRHGDDDARSFFKRSFSDGNILNESSTPMSAPKAKHEKFPSQGGLPDRSEEGSKGLCESSPEISTTDSDISFSRYTPSMPRRQLFGDMQRERCLESEHIYYSDHGDSFSCSNFVDLDWLSSSGNSCEEEPFERSSITNSPIAGVSSENVINGMMVGEATASTSDWGASSLKGREQTESELSYDDARSNTPEEFPDTFVNWVTYGQTLCH 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00424 834 MobiDBLite consensus disorder prediction 647 701 - -
Gma17g00424 834 MobiDBLite consensus disorder prediction 453 476 - -
Gma17g00424 834 MobiDBLite consensus disorder prediction 457 475 - -
Gma17g00424 834 MobiDBLite consensus disorder prediction 788 816 - -
Gma17g00424 834 PANTHER PHOSPHOINOSITIDE PHOSPHATASE SAC3-RELATED 26 834 - -
Gma17g00424 834 MobiDBLite consensus disorder prediction 801 815 - -
Gma17g00424 834 MobiDBLite consensus disorder prediction 1 16 - -
Gma17g00424 834 PANTHER POLYPHOSPHOINOSITIDE PHOSPHATASE 26 834 IPR043573 GO:0043813|GO:0046856
Gma17g00424 834 ProSiteProfiles Sac phosphatase domain profile. 170 553 IPR002013 GO:0016791
Gma17g00424 834 MobiDBLite consensus disorder prediction 683 701 - -
Gma17g00424 834 MobiDBLite consensus disorder prediction 1 28 - -
Gma17g00424 834 Pfam SacI homology domain 107 403 IPR002013 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00424 Gma-Chr17 3424398 3433186 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00424 31 834 Acyl Lipid Metabolism Gene Families AT5G20840 62.668 0.0 1023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00424 K22913 - gmx:100781284 1669.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00424 17 3424398 3433186 Gma04g00531 04 4722892 4742602 ECH
Gma17g00424 17 3424398 3433186 Gma06g00522 06 4432738 4438692 ECH
Gma17g00424 17 3424398 3433186 Gma17g00424 17 3424398 3433186 ECH
Gma17g00424 17 3424398 3433186 Gma13g00948 13 23631000 23641077 GST
Gma17g00424 17 3424398 3433186 Gma15g01706 15 18293998 18309836 PCT
Gma17g00424 17 3424398 3433186 Gma09g00677 09 7974289 7990521 PCT
Gma15g01706 15 18293998 18309836 Gma17g00424 17 3424398 3433186 PCT
Gma09g00677 09 7974289 7990521 Gma17g00424 17 3424398 3433186 PCT