Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00419 ATGGCATCAAGGAAAGCTCTTGACCAATGCTTGGTTCTGCCAATCTTGCTAATGAATTGTTTTGTTTTGCTGGGTCAATGTGCTAGGCCACTGAACACAGAAGGAGGAGAGGATTTGGTCACAGCAACCTGCAAGCACACCCTCCATTTCGAACTATGCATTTCTACCTTGAGATCAGTCCCTGCTAGCAAGACATCAGATCTAAAAGTGCTTGCTGAGATTGCATTGAATCTGAGCACAACATATGCTGCAGACACTTTGTCCTATGTTCATGAGCTGCAGTCCAATTCTTCTGCTGCCAATTATGGCTCCAACAACATCATTTACGCGTCACGTTGCTTAAGTGACTGTGCAGAGGAATACTCAGAAGCCATAGAGAACTTGAAGGACTCCAAAGAAGCACTTGCTGATGGAGATTGTGACCAAGTGGACACGTTGGTTTCTGCTGCTATGTCTGATGCTGAGACATGTGAGGATGGCTTCAAGGACATGCAAAGTGGGGATAGTGATTCTACCTCTCCTCTTACTGAGAGGAATCGTTACTTCTCTGAACTCTGTAGTAATGCTCTTGCCATTACAAAACTACTAGTTTAA 594 0.4444 MASRKALDQCLVLPILLMNCFVLLGQCARPLNTEGGEDLVTATCKHTLHFELCISTLRSVPASKTSDLKVLAEIALNLSTTYAADTLSYVHELQSNSSAANYGSNNIIYASRCLSDCAEEYSEAIENLKDSKEALADGDCDQVDTLVSAAMSDAETCEDGFKDMQSGDSDSTSPLTERNRYFSELCSNALAITKLLV 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00419 197 Gene3D Invertase/pectin methylesterase inhibitor family protein 36 197 IPR035513 -
Gma17g00419 197 Coils Coil 114 138 - -
Gma17g00419 197 SMART PMEI_2 35 192 IPR006501 GO:0004857
Gma17g00419 197 TIGRFAM PME_inhib: pectinesterase inhibitor domain 14 196 IPR006501 GO:0004857
Gma17g00419 197 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 38 196 IPR035513 -
Gma17g00419 197 PANTHER OS05G0360900 PROTEIN 32 196 - -
Gma17g00419 197 Pfam Plant invertase/pectin methylesterase inhibitor 38 192 IPR006501 GO:0004857
Gma17g00419 197 CDD PMEI-like_1 39 196 - -
Gma17g00419 197 PANTHER PECTINESTERASE INHIBITOR-LIKE 32 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00419 Gma-Chr17 3384924 3385859 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00419 40 192 Carbohydrate Esterase AT5G53370 29.878 1.39e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00419 - - gmx:100785210 385.185