Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00417 ATGGCGTTTCAGGACTTTGATCTCATCTCAGAGAGGAGAAGGAACGAGAAGAGGCAAAAGGCGAGGAAGAGGATCATGATTGGCGTGGTCTCTTCCGTTGTCCTCGTTGCCATGATAGGTGCAGTACTCTTCGTTGTGGTTAGAAACGACAACGAAGCAGGCAACAAAAAAAGCAATGAAAACAAGTCACATGGCCATTCACAACAATCTACCACCCCCGGCAAGGATCACGTTGTGGCGCATTCGAAGATGGTGAAATTGGTGTGCAGCTCCGCGGACTACAAGGAAAAATGTGAAGACCCTCTTAACAAGGCAATGGAGGATGACCCCAAACTCACGCAACCAAAAGACCTTCTCAAGGCATATGTCAAATTTGCTGAGGATGAGGTTAGCAAGGCCTTCAACAAAACCATCTCCATGAAGTTTGAAAATGAGCAAGAGAAAGGTGCATTTGAAGATTGCAAGAAGCTCTTTGAGGATGCCAAGGACGACATTGCAACCTCCATATCCGAACTTGAAAAAATTGAGATGAAGAACCTTTCTCAAAGGACTCCTGATTTCAACAGCTGGCTCAGTGCTGTCATCTCCTTCCAACAGAATTGTGTTGATGGCTTTCCCGAGGGAAACACAAAGACTGAACTTCAGACTCTCTTCAACGATTCCAAGGAATTCGTTAGCAACTCCCTTGCCATTCTGTCTCAGGTTGCATCGGCTCTTTCAACAATCCAAACACTAGCACGAGGCAGCCGTTCGTTGCTGTCTGAGAACAGCAACTCCCCAGTTGCTTCTCTAGACAAAGCTGATGGCCTTCCTTCTTGGATGAACCATGAGGACCGAAGGGTATTGAAGGCTATGGATAACAAACCTGCACCTAATGTCACCGTGGCTAAAGATGGCAGCGGAGACTTCAAAACCATCTCTGAATGTTTAAATGCAGTCCCTCAAAATTTTGAAGGACGTTATGTGATTTTTGTTAAAGAAGGAGTATACGATGAGACTGTGACCATAACAAAGAAAATGCAAAATATAACCATGTATGGTGATGGATCCCAAAAGAGCATCATCACTGGCAACAAAAACTTTAGGGACGGTGTCAGGACTTTCCTAACTGCAAGTTTTGTGGTAGAGGGAGATGGATTCATAGGCCTAGCAATGGGATTCAGAAACACTGCAGGCCCTGATGGCCACCAAGCAGTGGCTGCAAGAGTGCAGGCGGATCGTGCAGTGTTTGCCAACTGTCGGTTCGAGGGCTACCAAGACACTCTATACACCCAAGCCCACAGACAATTCTACAGGAGCTGCATCGTTACAGGAACAATCGATTTCATCTTTGGCGACGCAGCTGTCGTGTTCCAGAACTGCATCATGGTAGTTAGGAAGCCATTGGAAAACCAGCAGAACATGGTGACTGCTCAAGGGAGAGTCGACAAGCAACAAGTCACTGGAATTGTGCTGCAGAAATGCACAATCAAGGCTGATGATTCACTGGTTCCAGAGAAGGACAAGATCAGGAGCTACCTTGGGAGGCCGTGGAAGGAGTTCTCGAGAACAATTGTGATGGAATCGGAAATAGGTGACTTCATTCACCCCGATGGATGGACAGCTTGGGAGGGAGACTTTGCTCTCAAGACATTGTACTATGCTGAGTATGGCAACACAGGACCTGGTGCCAGCACCAATGCTAGGATCAAGTGGCCTGGTTACCAAGTCATTAACAAGGATGAGGCTAGCCAGTTCACTGTGGGATCTTTCTTGAGAGGCACATGGCTCCAGAACACGGGCGTGCCTGCCACGCAAGGCTTGTACAATTAA 1812 0.4719 MAFQDFDLISERRRNEKRQKARKRIMIGVVSSVVLVAMIGAVLFVVVRNDNEAGNKKSNENKSHGHSQQSTTPGKDHVVAHSKMVKLVCSSADYKEKCEDPLNKAMEDDPKLTQPKDLLKAYVKFAEDEVSKAFNKTISMKFENEQEKGAFEDCKKLFEDAKDDIATSISELEKIEMKNLSQRTPDFNSWLSAVISFQQNCVDGFPEGNTKTELQTLFNDSKEFVSNSLAILSQVASALSTIQTLARGSRSLLSENSNSPVASLDKADGLPSWMNHEDRRVLKAMDNKPAPNVTVAKDGSGDFKTISECLNAVPQNFEGRYVIFVKEGVYDETVTITKKMQNITMYGDGSQKSIITGNKNFRDGVRTFLTASFVVEGDGFIGLAMGFRNTAGPDGHQAVAARVQADRAVFANCRFEGYQDTLYTQAHRQFYRSCIVTGTIDFIFGDAAVVFQNCIMVVRKPLENQQNMVTAQGRVDKQQVTGIVLQKCTIKADDSLVPEKDKIRSYLGRPWKEFSRTIVMESEIGDFIHPDGWTAWEGDFALKTLYYAEYGNTGPGASTNARIKWPGYQVINKDEASQFTVGSFLRGTWLQNTGVPATQGLYN 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00417 603 MobiDBLite consensus disorder prediction 53 77 - -
Gma17g00417 603 Gene3D - 286 601 IPR012334 -
Gma17g00417 603 TIGRFAM PME_inhib: pectinesterase inhibitor domain 78 235 IPR006501 GO:0004857
Gma17g00417 603 CDD PMEI-like_3 87 237 - -
Gma17g00417 603 PANTHER PECTINESTERASE 14 601 - -
Gma17g00417 603 Pfam Plant invertase/pectin methylesterase inhibitor 84 231 IPR006501 GO:0004857
Gma17g00417 603 PANTHER PECTINESTERASE 14 601 - -
Gma17g00417 603 Gene3D Invertase/pectin methylesterase inhibitor family protein 81 238 IPR035513 -
Gma17g00417 603 SUPERFAMILY Pectin lyase-like 289 600 IPR011050 -
Gma17g00417 603 ProSitePatterns Pectinesterase signature 2. 436 445 IPR033131 -
Gma17g00417 603 Pfam Pectinesterase 292 587 IPR000070 GO:0030599|GO:0042545
Gma17g00417 603 SMART PMEI_2 80 231 IPR006501 GO:0004857
Gma17g00417 603 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 83 234 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00417 Gma-Chr17 3379147 3381504 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00417 1 603 Carbohydrate Esterase AT2G26450 47.536 0.0 606
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00417 - - gmx:100784679 1204.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00417 17 3379147 3381504 Gma17g00417 17 3379147 3381504 ECH
Gma17g00417 17 3379147 3381504 Gma13g00953 13 23695748 23698079 GST
Gma17g00417 17 3379147 3381504 Gma15g01718 15 18613622 18615977 PCT
Gma17g00417 17 3379147 3381504 Gma09g00707 09 8434767 8437721 PCT
Gma15g01718 15 18613622 18615977 Gma17g00417 17 3379147 3381504 PCT
Gma09g00707 09 8434767 8437721 Gma17g00417 17 3379147 3381504 PCT