Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00415 ATGGCTATTCCTTCACTAATAAACCAGCCACAAAGAACACCCTCTCTCACATTCTCCTTCCTCCTCTTTCTCGCTATCTGCACCCCATTGGATGCTGCTCACACCGACTTCGCAGGTTCAGCCTGCCTCAAAGTTTCCCCTAGCCACTTCGCCGGCTCAGTCACCGAAGTCATCACTGCCATACGTCAACTCGCTTCGATCCTCTCACGCTTCGGCTCTCCCTTGGCCAACTTCCGCCTCAGCACCGCCATCGCCGACTGCCTGGACTTGCTCGACCTCTCCTCCGACGTCCTCTCCTGGGCCCTCTCGGCCTCTCAGAACCCCAAAGGGAAGCATAACAGTACGGGGAACCTGAGTTCGGATTTGAGGACATGGCTAAGTGCGGCGCTTGCGCATCCAGAGACGTGCATGGAGGGATTCGAAGGGACAAACAGCATTGTGAAGGGTTTGGTCTCGGCAGGCATCGGGCAAGTTGTGTCGTTGGTGGAGCAGCTTCTTGCGCAAGTTCTTCCCGCACAGGATCAATTTGACGCCGCCAGCAGCAAGGGGCAATTTCCTTCTTGGATTAAGCCCAAGGAAAGGAAGCTGCTGCAAGCAATTGCAGTCACTCCTGATGTCACTGTAGCTTTAGATGGGAGTGGGAACTACGCTAAGATCATGGATGCGGTGCTTGCGGCTCCTGATTATAGCATGAAGCGTTTTGTGATTTTGGTAAAGAAGGGTGTTTATGTTGAGAACGTGGAGATCAAGAAGAAGAAGTGGAATATTATGATTCTTGGACAGGGGATGGATGCCACCGTCATCTCCGGTAACCGGAGTGTCGTCGACGGCTGGACCACCTTCCGCTCAGCTACATTCGCTGTGAGTGGCAGAGGGTTCATAGCAAGAGACATATCCTTTCAGAACACAGCAGGGCCCGAGAAGCACCAAGCAGTGGCACTAAGATCAGACTCTGACCTTTCCGTGTTCTTCCGATGTGGGATTTTCGGTTACCAAGACAGTCTCTACACCCACACAATGCGCCAATTCTTCAGAGACTGCACAATCAGCGGCACAGTTGATTACATCTTCGGTGACGCCACTGCAGTGTTCCAAAACTGCTTCCTAAGAGTAAAAAAAGGCTTACCAAACCAAAAGAACACAATCACAGCACACGGTAGAAAAGACCCAAATGAACCAACCGGTTTCTCATTCCAGTTCTGCAACATAACTGCAGATTCTGATCTTATACCTTCTGTTGGAACCGCACAAACGTACCTGGGGAGACCCTGGAAGAGTTACTCACGAACCGTTTTCATGCAATCGTACATGAGTGAGGTGATAGGGGCAGAAGGGTGGTTGGAGTGGAATGGAAACTTTGCATTGGACACATTGTACTATGCTGAGTACATGAACACTGGAGCAGGTGCTGGAGTTGCTAACCGTGTGAAGTGGCCAGGGTACCATGCATTGAATGATTCGAGCCAGGCTAGTAACTTCACCGTGTCTCAATTTATTGAGGGGAATCTATGGTTGCCTTCAACTGGAGTAACCTTCACTGCGGGACTCACAGTTTAA 1557 0.5087 MAIPSLINQPQRTPSLTFSFLLFLAICTPLDAAHTDFAGSACLKVSPSHFAGSVTEVITAIRQLASILSRFGSPLANFRLSTAIADCLDLLDLSSDVLSWALSASQNPKGKHNSTGNLSSDLRTWLSAALAHPETCMEGFEGTNSIVKGLVSAGIGQVVSLVEQLLAQVLPAQDQFDAASSKGQFPSWIKPKERKLLQAIAVTPDVTVALDGSGNYAKIMDAVLAAPDYSMKRFVILVKKGVYVENVEIKKKKWNIMILGQGMDATVISGNRSVVDGWTTFRSATFAVSGRGFIARDISFQNTAGPEKHQAVALRSDSDLSVFFRCGIFGYQDSLYTHTMRQFFRDCTISGTVDYIFGDATAVFQNCFLRVKKGLPNQKNTITAHGRKDPNEPTGFSFQFCNITADSDLIPSVGTAQTYLGRPWKSYSRTVFMQSYMSEVIGAEGWLEWNGNFALDTLYYAEYMNTGAGAGVANRVKWPGYHALNDSSQASNFTVSQFIEGNLWLPSTGVTFTAGLTV 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00415 518 Gene3D - 199 516 IPR012334 -
Gma17g00415 518 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 44-RELATED 45 516 - -
Gma17g00415 518 CDD PMEI-like_4 15 169 - -
Gma17g00415 518 PANTHER PECTINESTERASE 45 516 - -
Gma17g00415 518 SMART PMEI_2 33 168 IPR006501 GO:0004857
Gma17g00415 518 SUPERFAMILY Pectin lyase-like 200 515 IPR011050 -
Gma17g00415 518 Pfam Plant invertase/pectin methylesterase inhibitor 55 152 IPR006501 GO:0004857
Gma17g00415 518 Gene3D Invertase/pectin methylesterase inhibitor family protein 37 170 IPR035513 -
Gma17g00415 518 ProSitePatterns Pectinesterase signature 2. 349 358 IPR033131 -
Gma17g00415 518 Pfam Pectinesterase 205 502 IPR000070 GO:0030599|GO:0042545
Gma17g00415 518 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 53 163 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00415 Gma-Chr17 3369014 3372685 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00415 11 516 Carbohydrate Esterase AT3G43270 62.115 0.0 683
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00415 K01051 - gmx:100814987 1008.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00415 17 3369014 3372685 Gma13g00955 13 23703865 23708206 GST
Gma17g00415 17 3369014 3372685 Gma15g01726 15 18691243 18693960 PCT
Gma17g00415 17 3369014 3372685 Gma09g00713 09 8502201 8504886 PCT
Gma15g01726 15 18691243 18693960 Gma17g00415 17 3369014 3372685 PCT
Gma09g00713 09 8502201 8504886 Gma17g00415 17 3369014 3372685 PCT