Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00405 ATGATGGCGACGAGTAACAACGCGTCATGCCCAGCACCCATGAAGGCAACGTCGAATGGGGCGTTCCAACATGAGAACCCGCTCGATTATGCGCTTCCTCTGTTAATCCTCCAGATTTGTTTGGTCGTCTTTTTTACTAGATTTATTGCATTCCTCTGCAGACCCCTCAGACAACCCCGAGTCATTGCTGAGATCATTGGAGGAATACTACTTGGGCCATCTGCAATTGGACGAAATGAGAAGTTTCTGAACACGGTTTTCCCAAAGAAAAGCATAACGGTTCTTGACACACTAGGCAACATTGGTCTTTTGTTTTTCTTGTTTCTAGTTGGTCTTGAGCTTGACATGCGTGCGATTCGTCGTACTGGTCACAAGGCCTTAGGCATTGCCCTTTGTGGAATCACTGTGCCTTTTGTTCTTGGCATTGGCACTTCTTTTGCTCTTAGAGCCACCGTGTCCAAAGGTGCTGAGCCAGTTTCCTTTCTTGTCTTCATGGGTGTTGCACTCTCAATCACTGCCTTCCCTGTCCTTGCAAGGATCCTAGCTGAGCTCAAACTCCTCACCACTGATGTTGGTCGCATAGCAATGTCTGCTGCAGCTGTCAATGATGTTGCAGCTTGGATTCTTCTTGCACTTGCCATAGCCATTTCTGGTTCTAATGGATCCCCCTTAGTTCCTCTCTGGGTCTTGCTCTCTGGTGTTGCTTTTGTTCTCTTTGCTGTATTTGCCATTAGGCCATTGCTTGTAGCTATGGCTAACCGTTCCCCCGAGGGTGAGCCAGTGAAGGAGGTTTACATATGCATCACATTGACACTGGTTTTGGCTTGTAGCTTTGTCACTGATACTATTGGAATCCATGCCCTCTTTGGGGCTTTTGTGCTTGGTACCATTATGCCCAAAGATGGTTCCTTTTCTGGGGTGTTGATTGAGAAGATAGAAGACTTGGTGTCTGGCCTTTTCCTGCCACTGTTTTTTGTGTCTAGTGGCTTGAAGACTAATGTGGCAAGTATTAGTGGAGGACTTTCTTGGGCAATGTTGGTGCTTGTTATATTCAATGCTTGCTTTGGGAAGATTGTTGGCACAATCGTTGTGTCGTTAATCTGCAAGGTGCCTTCTCATGAAGCCGTGGCACTTGGATTTCTTATGAACACAAAGGGCTTGGTAGAACTCATCGTTCTCAACATAGGGAAGGACCGTAAGGTGTTGAATGACCAAGCATTTGCCATTTGTGTTCTCATGGCATTGTTTACCACCTTCATCACCACCCCAATAGTAATGGCTGTTTATAAACCAGCTCGCAGAGGAGCACCTTACAAACACAAAACAATTCAGCGCAGAGATCCTGACACTGAGCTTCGAATGCTAATTTGCTTCCACACCTCCCGCAACATCCCCACGTTAATCAATCTCATAGAGTCTTCCCGCGGAATTCGAAAGAGAGGAAAGCTTTGCATATATGCAATGCACCTGGTGGAACTCTCAGAGCGATCTTCAGCAATCACAATGGTTCACAAGGCACGTAGGAATGGCATGCCCTTTTGGAACAAGAAACAGGATGACAAAGATCAAATGATCATTGCTTTTCAGGCTTATGAGAAACTAAGCAGTGTCAATGTGCGCCCCATGACAGCCATCTCTGCTCTCAATAGCATCCATGAGGATATTTGTACTAGTGCCCACCGAAAATGTGCAGCCATGATTATCCTTCCATTCCACAAACATCAACGTGTGGATGGATCAATGGAGTCACTAGGACATTCATTCCATGTGATGAATCAGCTTGTGCTAAGCCATGCTCCTTGCTCAGTGGGTATTTTGGTTGATCGAGGTTTTGGAGGGACAAGCCAAGTCCCAGCTAGTGATGTGTCTTATAAGGTTGTTGTGCCCTTCTTTGGAGGACGTGATGATCGTGAAGCACTTTGTTATGGTATGAGAATGGCTGAGCACCCGGGGATTTTGCTCAATGTGGTTAAGTTTATGCCTCCACCTGGGACATCATTGGCCTTTGGTGCTAAATTGGTTGGGGTGTCATCAAACAAGGACAAGAAAGCATTCGAAGTGGTTGGTGGCAATTATTATGATGATAAACAACAAGATGATCAATTGTGGAGTGAGTTTTTAAGTGCATGCAACAACAACAACCAAGAGTCAATGAAGCATGAGCAAAAACTGGTGGCAAGCAAAGGTGATATTGAAGCAGCATTAAAGGAAATGAATAGGAGCAATCTAATATTGGTTGGTAGAATGCCATCAGTAGCACCTTTGATTAGCAGAAGTGATTGTCCAGAACTTGGACCTGTTGGAAGCTACATGGCTTCTTCAGATTTCTCCAATGTTACATCAGTTATGGTAATTCAGCAATATAATCCTTCAACTGACATTCATCCACTAGTTATGGAGGAATCTGATTACCCAGATATGCCAGACACACCAACGAGTTAA 2442 0.4496 MMATSNNASCPAPMKATSNGAFQHENPLDYALPLLILQICLVVFFTRFIAFLCRPLRQPRVIAEIIGGILLGPSAIGRNEKFLNTVFPKKSITVLDTLGNIGLLFFLFLVGLELDMRAIRRTGHKALGIALCGITVPFVLGIGTSFALRATVSKGAEPVSFLVFMGVALSITAFPVLARILAELKLLTTDVGRIAMSAAAVNDVAAWILLALAIAISGSNGSPLVPLWVLLSGVAFVLFAVFAIRPLLVAMANRSPEGEPVKEVYICITLTLVLACSFVTDTIGIHALFGAFVLGTIMPKDGSFSGVLIEKIEDLVSGLFLPLFFVSSGLKTNVASISGGLSWAMLVLVIFNACFGKIVGTIVVSLICKVPSHEAVALGFLMNTKGLVELIVLNIGKDRKVLNDQAFAICVLMALFTTFITTPIVMAVYKPARRGAPYKHKTIQRRDPDTELRMLICFHTSRNIPTLINLIESSRGIRKRGKLCIYAMHLVELSERSSAITMVHKARRNGMPFWNKKQDDKDQMIIAFQAYEKLSSVNVRPMTAISALNSIHEDICTSAHRKCAAMIILPFHKHQRVDGSMESLGHSFHVMNQLVLSHAPCSVGILVDRGFGGTSQVPASDVSYKVVVPFFGGRDDREALCYGMRMAEHPGILLNVVKFMPPPGTSLAFGAKLVGVSSNKDKKAFEVVGGNYYDDKQQDDQLWSEFLSACNNNNQESMKHEQKLVASKGDIEAALKEMNRSNLILVGRMPSVAPLISRSDCPELGPVGSYMASSDFSNVTSVMVIQQYNPSTDIHPLVMEESDYPDMPDTPTS 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00405 813 Pfam Sodium/hydrogen exchanger family 40 424 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Gma17g00405 813 Gene3D - 34 436 IPR038770 -
Gma17g00405 813 PANTHER CATION/H+ EXCHANGER 3 7 811 - -
Gma17g00405 813 PANTHER CATION/H + ANTIPORTER 7 811 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00405 Gma-Chr17 3278802 3282915 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00405 1 804 Antiporter Super Family AT3G17630 67.164 0.0 1082
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00405 - - gmx:100780382 1573.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00405 17 3278802 3282915 Gma17g00405 17 3278802 3282915 ECH
Gma17g00405 17 3278802 3282915 Gma13g00965 13 23794293 23797921 GST