Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00385 ATGGCCAGACAGCAAGATTTCAAGAAGAACAAGATGATGAAGAAGGAGGAAAGTAACAAAACACTACCATTTCACAAACTTTTTTCATTTGCAGACTCAAGGGATTATCTATTGATGTTTGTTGGGACAATAAGTGCTGCTGGGAATGGAATGACTAAGGCTTCAACGAATATAGTTATGGGAGAAGCAATTGAAGCTTTTAGAAGAAGTGGTAACACTAAACAAGTAGTTCATGAAGTTTCCCAGGTGTCTCTGAAGTTCGCACTACTAGGTGCAATTTCCTTTCTGGCAGCATTTCTACAGGTGGCTTGTTGGGTATCCACCGGGGAGAGACAAGCAGCGAGAATTCGAGGCTTATACCTCAAAGCAGTTCTGAGACAAGATATAAGCTACTTTGACAAGGAAACCAATACTGGTGAGGTTGTTGAAAGGATGTCAGGTGACACAGTTCTTATTCAAGAAGCCATGGGAGAGAAGGTAGGAAAATTCATACAGTGTGTAGCATGTTTTTTAGGAGGTTTAGTCATAGCATTCATCAAGGGTTGGTTTCTAACCCTTGtccttctatcttgtattccacctcttgtcctctccggctccataatgagcattgcttttgcaaagttggcatcccgtggacaagcagcttattctgaagcagcaactgtagcagcgtgtgcaattggttcaattcgaactgttgcatcatttacaggcgagaatcaagctatagctcaatacaatcaatccttaacaaaagcttacaggactgcagtgcaagatggagtggctgctggtttaggcctggggtcaatccGTTTTTTTATTACCAGTAGTTTTGCATTGGCTTTATGGTTTGGAGCAAAGATGGTACTAGAGAAAGGCTATACACCAGGTCAAGTCATGAGTATATTTCTGGCACTATTTTATGCCTCCATGTCTTTGGGGCAGGTTTCTACAAATTTAACAGCATTTGCTGCAGGACAAGCTGCCGCCTTTAAAATATTTGAAACAATAAATAGGCATCCAGATATTGATGCTTACGACACTGCTGGTCAACAGAAAGATGATATTTCTGGAGATATAGAACTTAGGGAGGTTTGCTTTAGTTATCCTTCAAGACCAGATGCATTGATATTCAATGGATTTTCTATTTCAATATCAAGTGGTACTAATGCAGCTTTGGTTGGGAAAAGTGGGAGTGGGAAATCAACAGTTATTAGTTTGATTGAGAGATTTTATGATCCACAAGCTGGTGAAGTTCTTATTGATGGTATCAACCTCAGAGAATTACAGTTGAAATGGATCAGACAGAAAataggccttgtcagccaggaaccggttctcttccattgtagcattaaagaaaatattgcctatggtaaggatggggcaacagatgaagaaatcagagccgccactgaacttgctaatgcagctaaattcatagataaatttccacatGGACTTGACACAGTTGCTGGTGAGCATGGTACACAGCTCTCTGGGGGTCAAAAGCAAAGAATTGCCATAGCAAGGGCAATTCTGAAAGATCCAAGAGTTCTGCTCCTTGATGAAGCTACAAGTGCCCTTGACGCTGAGTCTGAGAGAGTGGTGCAAGAGACACTAGACAAAGTTATGATAAACCGAACAACGATCATTGTAGCACACCGCCTAAACACAATAAGGAATGCTGATACCATATCTGTTATTCATCAAGGAAGAGTAGTAGAAAATGGTACACATGCGGAGCTCATTAAAGATCCAGATGGAGCTTATAGCCAGCTCATTAGATTGCAAGAAATTAACAAGCAGTTAGATGGTACAGATGACTCCGGCAGGGTAGAAAACTCTGTAGATTCTGAACGACAATCAAGCCAGTGGTTTCCTTTCCCTCAATCTTTAAGCTTGGGATCATCTGGAACAGGAAACAGCAGTCATGACTCATTCAGAATATCAAATGCTATGCCTACTACACTTGATCTCTTGAAAACATCAGAAGAAGGACCTGAAGTTCTTCCTCCAGTAGTATCACATTCACCTCCCGAAGTCTCATTCCTTCACCTTGTTTATCTTAACAAGCCTGAAATCCCAGAGTTAGTCCTAGGGACTCTAGCTGCCATAGTAACTGGGGCAATACTACCCCTTATGGGGTTTCTTATCTCCAACATGATAAATACTTTCCTTGAGCCTGCAGATGAACTCCGTAAAGTCTCAAAGTTTTGGGCATTAATGTTTATTGCCCTTGGTGTAGCTGGCACCATATTTCATCCAATAAGGTCATACTTTTTTGCTGTAGCTGGTTCTAAGTTGATAAAAAGGATCGGGCTGATGTGTTTCAAGAAAATTATTCACATGGAAGTAGGCTGGTTTGACAAAGCTGGGAATTCAAGTGGAATACTTGGAGCAAGGCTGTCACTTGATGTGGCTTCTATTCGAACTTTTGTTGGGGATGCACTCGGTTTGATGGTTCAAGATGTTGCTACAGTAATCATAGCCTTGGTAATCGCCTTTGAGGCAAACTGGCAGCTTTCTCTCATCATTCTTGTTTTGCTACCTCTATTATTAGTAAATGGACAAGTGCAAATGGGATCCATGCAAGGATTTGTCACTGATGCAAAGAAACTATATGAGGAAGCAAGTCAAGTAGCGAATGACGCAGTAGGGAATATCAGAACAATTGCCGCTTTTTGTGCTGAAGAGAAGGTAATGAACTTATACCAGAAGAAATGTTTAGGACCCATCAAGACAGGTATATGGCAAGGTATAGTCAGCGGAACAAGTTTTGGGTTATCACTCTTCTTGGTGTTCTCGGTTAATTCATGCAGTTTTTATGCTGGAGCCCGACTTGTTGAGAATGGCAAAACATCAATCTCAGATGTTTTCCGTGTGTTTTTCACTCTCACAATGGCAGCTATAGCAATTTCACAATCTGGCTTCATGGCCCCAGGTGCAAGCAAAGCAAAAAGTTCTGTTACTTCTATATTTGCTATTCTTGACCAGAAATCAAGAATAGATCCCAGTGATGAGTGCGGAATGACATTGCAAGAAGTGAAGGGAGAAATTGAGTTCCACCATGTCACTTTCAAGTATCCAACCAGGCCTAATGTTCTTCTATTCAGAGATCTTTCCTTGACCATTCATGCAGGGGAGACAGTTGCTCTAGCAGGCGAAAGTGGAAGTGGAAAGTCAACAGTAATCTCATTGCTGCAAAGATTTTATGAGCCAGATTCAGGTCAGATTACACTGGATGGAACAGAAATCCAAAAGCTACAACTTAAATGGTTTAGGCAGCAGATGGGTCTGGTAAGCCAGGAGCCTGTGCTGTTTAATGATACCATCAGAACCAACATTGCATATGGAAAAGGAGGTGATGCAACAGAAGCTGAAATTATAGCTGCAACTGAACTGGCAAATGCCCACACGTTCATTAGCAGTTTGCAGCAGGGTTATGACACCATAGTAGGGGAGAGAGGGATTCAACTATCTGGAGGGCAGAAGCAGCGGGTGGCAATTGCAAGAGCCATAGTGAAGAATCCAAAAATATTACTGCTAGATGAAGCCACAAGTGCACTTGATGTTGAGTCTGAAAGAGTGGTTCAGGATGCACTAGACCAAGTGATGGTGGACCGAACCACAATTGTGGTGGCTCACAGGTTATCCACCATAAAGGATGCAGATTCGATAGCAGTTGTTCAAAATGGAGTCATTGCTGAGCAAGGAAAACATGACACTTTGCTTAACAAGGGTGGTATCTATGCTTCATTAATCCCTTCCTCCATCACAAACCCCCTAGTCTTCCTCCCAAACTACTTCCAAGCCCTAAGAATCGGCGACCCCGACGGAGCCTTCCGCTTCCCCGGCGTCACCCACGGCGACTACTTCTTCGGGGCGGGTCTCGAGGAGCACCTCGCCGAGAACAATCCTAACCGTTACGGCACCCCACCGGTCTCCAAGTCCGCCGTCGAGGGCCTGCGACTTAGAGAAGTTGTATCGTTTTCGTTTCCAAGGTTGCGACTATGTGCAAGGAGCGGCTACACGAGATCGTGA 4050 0.3862 MARQQDFKKNKMMKKEESNKTLPFHKLFSFADSRDYLLMFVGTISAAGNGMTKASTNIVMGEAIEAFRRSGNTKQVVHEVSQVSLKFALLGAISFLAAFLQVACWVSTGERQAARIRGLYLKAVLRQDISYFDKETNTGEVVERMSGDTVLIQEAMGEKVGKFIQCVACFLGGLVIAFIKGWFLTLVLLSCIPPLVLSGSIMSIAFAKLASRGQAAYSEAATVAACAIGSIRTVASFTGENQAIAQYNQSLTKAYRTAVQDGVAAGLGLGSIRFFITSSFALALWFGAKMVLEKGYTPGQVMSIFLALFYASMSLGQVSTNLTAFAAGQAAAFKIFETINRHPDIDAYDTAGQQKDDISGDIELREVCFSYPSRPDALIFNGFSISISSGTNAALVGKSGSGKSTVISLIERFYDPQAGEVLIDGINLRELQLKWIRQKIGLVSQEPVLFHCSIKENIAYGKDGATDEEIRAATELANAAKFIDKFPHGLDTVAGEHGTQLSGGQKQRIAIARAILKDPRVLLLDEATSALDAESERVVQETLDKVMINRTTIIVAHRLNTIRNADTISVIHQGRVVENGTHAELIKDPDGAYSQLIRLQEINKQLDGTDDSGRVENSVDSERQSSQWFPFPQSLSLGSSGTGNSSHDSFRISNAMPTTLDLLKTSEEGPEVLPPVVSHSPPEVSFLHLVYLNKPEIPELVLGTLAAIVTGAILPLMGFLISNMINTFLEPADELRKVSKFWALMFIALGVAGTIFHPIRSYFFAVAGSKLIKRIGLMCFKKIIHMEVGWFDKAGNSSGILGARLSLDVASIRTFVGDALGLMVQDVATVIIALVIAFEANWQLSLIILVLLPLLLVNGQVQMGSMQGFVTDAKKLYEEASQVANDAVGNIRTIAAFCAEEKVMNLYQKKCLGPIKTGIWQGIVSGTSFGLSLFLVFSVNSCSFYAGARLVENGKTSISDVFRVFFTLTMAAIAISQSGFMAPGASKAKSSVTSIFAILDQKSRIDPSDECGMTLQEVKGEIEFHHVTFKYPTRPNVLLFRDLSLTIHAGETVALAGESGSGKSTVISLLQRFYEPDSGQITLDGTEIQKLQLKWFRQQMGLVSQEPVLFNDTIRTNIAYGKGGDATEAEIIAATELANAHTFISSLQQGYDTIVGERGIQLSGGQKQRVAIARAIVKNPKILLLDEATSALDVESERVVQDALDQVMVDRTTIVVAHRLSTIKDADSIAVVQNGVIAEQGKHDTLLNKGGIYASLIPSSITNPLVFLPNYFQALRIGDPDGAFRFPGVTHGDYFFGAGLEEHLAENNPNRYGTPPVSKSAVEGLRLREVVSFSFPRLRLCARSGYTRS 1349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00385 1349 ProSitePatterns ABC transporters family signature. 1162 1176 IPR017871 GO:0005524
Gma17g00385 1349 Gene3D ABC transporter type 1, transmembrane domain 86 996 IPR036640 GO:0005524|GO:0016021
Gma17g00385 1349 Gene3D - 360 618 IPR027417 -
Gma17g00385 1349 Pfam ABC transporter 1041 1190 IPR003439 GO:0005524
Gma17g00385 1349 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 40 327 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma17g00385 1349 Pfam ABC transporter 381 529 IPR003439 GO:0005524
Gma17g00385 1349 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 16 1259 IPR039421 -
Gma17g00385 1349 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 357 600 IPR027417 -
Gma17g00385 1349 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 362 598 IPR003439 GO:0005524
Gma17g00385 1349 Pfam ABC transporter transmembrane region 700 972 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma17g00385 1349 Pfam ABC transporter transmembrane region 39 312 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma17g00385 1349 MobiDBLite consensus disorder prediction 607 632 - -
Gma17g00385 1349 CDD ABC_6TM_Pgp_ABCB1_D2_like 691 1005 - -
Gma17g00385 1349 CDD ABC_MTABC3_MDL1_MDL2 362 600 - -
Gma17g00385 1349 CDD ABC_MTABC3_MDL1_MDL2 1022 1257 - -
Gma17g00385 1349 Gene3D - 1012 1263 IPR027417 -
Gma17g00385 1349 CDD ABC_6TM_Pgp_ABCB1_D1_like 39 323 - -
Gma17g00385 1349 SUPERFAMILY ABC transporter transmembrane region 20 344 IPR036640 GO:0005524|GO:0016021
Gma17g00385 1349 ProSitePatterns ABC transporters family signature. 501 515 IPR017871 GO:0005524
Gma17g00385 1349 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1013 1258 IPR027417 -
Gma17g00385 1349 SMART AAA_5 389 575 IPR003593 -
Gma17g00385 1349 SMART AAA_5 1049 1242 IPR003593 -
Gma17g00385 1349 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 701 987 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma17g00385 1349 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1022 1259 IPR003439 GO:0005524
Gma17g00385 1349 PANTHER TRANSPORTER ABC DOMAIN PROTEIN 16 1259 - -
Gma17g00385 1349 SUPERFAMILY ABC transporter transmembrane region 690 1006 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00385 Gma-Chr17 3129832 3137435 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00385 6 600 Calmodulin-binding Proteins AT2G36910 36.120 8.67e-110 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00385 K05658 - gmx:100818527 2351.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00385 17 3129832 3137435 Gma13g00984 13 23947214 23952977 GST