Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00383 ATGGCAGAGGATATTGACTTGAATGGAGATCCTAACAGCAAGAAAGACTCAAAGAACAGAACCAAAATCTCCAACGAAGTTGTTGATGAAGTTTCTAAGGTGTCTCTGAAATTTGTATACTTGGCCGTGGGTACCTTTTTTGCGTCACTTTTGCCCAAAAACCTTGTTTGCTATGTATCAGGGCTGACATGCTGGATGATCACGGGGGAGAGACAAGCTGCAAGAATTAGAGGCTTATACCTTCAAAATATTTTGAGGCAAGATGCCAGCTTCTTTGATAAAGAAACTAGAACTGGAGAGGTTGTTGGAAAGATTTCAGGTTACACTGTTCTTATTCAAGATGCCATGGGTGAGAACGTGGCACAGTTCATACAGTTGATGACAACTTTCGTCGGAGGTTTTGTAATAGCATTCATCAGGGGATGGCTTCTAACTCTTGtcatgctatctagtattccacctcttgttttgtgtggttgtatgttaggcctgattattacgaaaacatcatccaggggacaagaagcttattctatagcagcaactgtagtagagcaggcaattggttctatcagaactgttgcatcattcacctgggagaagcaagctatagataaatataatcagtccttaatcaaaccttacaaggctggagtgcaagaagcactagctactgAGGAAGGATACACAGGAGGAGAGGTTGTGACAGTAATTATGGCTGTATTGACTGGCTCCTTGTCTCTTGGGCAGGCATCTCCAAGCTTGAGTGCTTTTGCTGCTGGACAAGCTGCAGCCTTTAAGATGTTTGAAACAATTAAAAGGAAGCCAGAGATTGATGCTTATGACATTACTGGTCGGCAGCTTGATGACATTCGTGAAGATATAGAGCTTAGGGAGGTTTGCTTTAGTTATCCTACTAGACTTGATGAACTGATATTCAATGGATTTTCTCTTTCAATACCAAGTGGCACTACTACAGCTTTGGTAGGAGAAAGTGGGAGTGGGAAATCCACAGTTGTTAGTTTGGTAGAGAGATTTTATGATCCACAGGCAGataaacttcctcagGGACTAGACACAATGGTTGGTGAGCATGGAGCTCAGCTCTCTGGGGGTCAAAAGCAAAGAGTTGCTATAGCAAGAGCAATTTTGAAAGACCCAAGAATCCTACTTCTGGATGAAGCTACAAGTGCCCTTGATGCTGAATCTGAGAAAATAGTACAGGAGGCATTAAACAGAATAATGATAAACCGAACAACTGTCATTGTAGCATACCGCTTAAGTACTATAAGGAATGCTGATAGCATTGCTGTTATTCATCAAGGAAAAATAGTTGAAAGAGGTTCACATGCTGAGCTTACCAAGGATGCTAATGGAGCTTATAGTCTGCTCATTAAACTGCAAGAAGTTAAAGGGTCAGAACAAAATGTTGCAAATGACACAGAAAGGCTAGAAAGTACTGTGCATTCTGGAATACATTCAAGTCAAAGATCTTTCTTACGATCTATAAGTCAAAGATCATCAGAAGTTGGAAGCAGTGGTCACAACTCATTCTCAGCATCACATGCGGTTGGCTTCTTGGAACCTGCAAATGGAGTACCTCAAACATCTCCAACAGTTTCTTCACCACCGGAAGTGCCACTCTATCGCCTGGCACATTTAAACAAACCTTACACTCCAGTCTTACCAGCAGGGAGTATAGCTGCAATAATAAATGGAGTGTTATTACCCATTGTTGCTATCTTCATGTCCAAAATGATAAGTATTTTCTATGAGCCAGTTGATGAACTTCGTAAAGATTCAAAACATTGGGCTTTACTATTTGTTGCACTTGGTGTGGTATCATTTGTGATGTCTCCATGTAGATTCTACCTTTTCAGCATTGCTGGTGGTAAGTTAATCAAAAGGATCTGGAAAATGTGTTTTAAGAAAGTAGTTCACATGGAAGTTAGTTGGTTCAACGAAGCTGAACATTCAAGGGGAGCAACTGGAGCAAGGCTCTCTTCTGATGCAGCTTCTCAGCTTGCTCTGGCACCTATATTAGCACTAAATGGATACGTGCAATTCAAGTTCTTGAAAGGAATCAGCGCAGATGCAAAGAAACTGTATGAGGAAACAAGTAAAGTGGCAAATGATGCAGTAGGGAGTTTAAGAACAGTTGCTTCTTTCTGTGCTGAAAAGAAGAGGATGGAAAAGCAACAGTGTCAGATGTTTTCCATGTCTTTTTTGCTCACCTTGGCAGCTTTGGGAATCTCTCAATCTGGATCTTTGGTCCCTGATTCAACTAATTCAAAAAGTGCTGCTGCTTCTGTATTTGCTATTCTTGACCGAAAGTCACAAATTGACCCAAaatcctttaGATTGACATTGGAAGAAGTCAATGGAGAGATTGAATTTAACCATGTCAGTTTCAAGTATCCTACTAGCTCTGATGTTCAAATACTCAGAGATCTTTGCTTGATGATTCATAATGGCAAGACAGTTGCACTGGTTGGAGAAACTGAAAGTGGAAAATCAACGGTGATCTTGTTATTACGAAGATTTTATGATCCAGACTCGGGTCACATTACTCTGGATGGAACAATCCAAAGGATGCAAGTTAAATGGCTGAGACAACAGATGGGCCTGGTGAGCCAAGAGCCTGTGCTGTTTAATGACACCATCAGAGCCAATATTGCATATGGAAAGGGCGGTGATGCAACAGAGGCAGAAATTATAGCTGCAGCAGAACTGAGTGTCTTATTCACTGAATCTCTCTTAATAAAGACTAGAGCAACTGGTTATGACACAATAGTAGGGGAGAGAGGGATTCAACTATTGGGAGGGCAGAAGCAGCGGGTGGCAATTGCACGAGCTATAGTGAAGAATCCAAAAATATTACTACTAGATGAGGCCACAAGTGCACTTGATGCTGAGTTTGAAAAGGTGGTACAGGATTCACTAGACTGTGTTATGGTGGACCGAACCACAATAGTAGTGGCTCATAGGTTATCAACTATAAAGGGTGCAGATCTAATTGCGGTAGTTAAAAATGGGGTCATAGCAGAGAAGGGAATGCATGAAGCATTACTCAACAAAGGAGGTGACTATGCTTCCTTAGTAGCGTTGCACACAACTGCTTCTACATCTTAG 3132 0.3803 MAEDIDLNGDPNSKKDSKNRTKISNEVVDEVSKVSLKFVYLAVGTFFASLLPKNLVCYVSGLTCWMITGERQAARIRGLYLQNILRQDASFFDKETRTGEVVGKISGYTVLIQDAMGENVAQFIQLMTTFVGGFVIAFIRGWLLTLVMLSSIPPLVLCGCMLGLIITKTSSRGQEAYSIAATVVEQAIGSIRTVASFTWEKQAIDKYNQSLIKPYKAGVQEALATEEGYTGGEVVTVIMAVLTGSLSLGQASPSLSAFAAGQAAAFKMFETIKRKPEIDAYDITGRQLDDIREDIELREVCFSYPTRLDELIFNGFSLSIPSGTTTALVGESGSGKSTVVSLVERFYDPQADKLPQGLDTMVGEHGAQLSGGQKQRVAIARAILKDPRILLLDEATSALDAESEKIVQEALNRIMINRTTVIVAYRLSTIRNADSIAVIHQGKIVERGSHAELTKDANGAYSLLIKLQEVKGSEQNVANDTERLESTVHSGIHSSQRSFLRSISQRSSEVGSSGHNSFSASHAVGFLEPANGVPQTSPTVSSPPEVPLYRLAHLNKPYTPVLPAGSIAAIINGVLLPIVAIFMSKMISIFYEPVDELRKDSKHWALLFVALGVVSFVMSPCRFYLFSIAGGKLIKRIWKMCFKKVVHMEVSWFNEAEHSRGATGARLSSDAASQLALAPILALNGYVQFKFLKGISADAKKLYEETSKVANDAVGSLRTVASFCAEKKRMEKQQCQMFSMSFLLTLAALGISQSGSLVPDSTNSKSAAASVFAILDRKSQIDPKSFRLTLEEVNGEIEFNHVSFKYPTSSDVQILRDLCLMIHNGKTVALVGETESGKSTVILLLRRFYDPDSGHITLDGTIQRMQVKWLRQQMGLVSQEPVLFNDTIRANIAYGKGGDATEAEIIAAAELSVLFTESLLIKTRATGYDTIVGERGIQLLGGQKQRVAIARAIVKNPKILLLDEATSALDAEFEKVVQDSLDCVMVDRTTIVVAHRLSTIKGADLIAVVKNGVIAEKGMHEALLNKGGDYASLVALHTTASTS 1043
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00383 1043 PANTHER - 226 351 - -
Gma17g00383 1043 Gene3D - 352 488 IPR027417 -
Gma17g00383 1043 Gene3D ABC transporter type 1, transmembrane domain 3 310 IPR036640 GO:0005524|GO:0016021
Gma17g00383 1043 ProSitePatterns ABC transporters family signature. 369 383 IPR017871 GO:0005524
Gma17g00383 1043 MobiDBLite consensus disorder prediction 8 22 - -
Gma17g00383 1043 SUPERFAMILY ABC transporter transmembrane region 550 778 IPR036640 GO:0005524|GO:0016021
Gma17g00383 1043 Pfam ABC transporter 357 397 IPR003439 GO:0005524
Gma17g00383 1043 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 295 466 IPR003439 GO:0005524
Gma17g00383 1043 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 26 224 - -
Gma17g00383 1043 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 352 673 - -
Gma17g00383 1043 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 226 351 - -
Gma17g00383 1043 SUPERFAMILY ABC transporter transmembrane region 46 279 IPR036640 GO:0005524|GO:0016021
Gma17g00383 1043 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 797 1036 IPR003439 GO:0005524
Gma17g00383 1043 MobiDBLite consensus disorder prediction 1 22 - -
Gma17g00383 1043 Gene3D - 788 1042 IPR027417 -
Gma17g00383 1043 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 564 671 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma17g00383 1043 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 289 468 IPR027417 -
Gma17g00383 1043 CDD ABC_6TM_Pgp_ABCB1_D1_like 24 256 - -
Gma17g00383 1043 PANTHER - 675 734 - -
Gma17g00383 1043 PANTHER - 737 1039 - -
Gma17g00383 1043 CDD ABC_6TM_Pgp_ABCB1_D2_like 554 781 - -
Gma17g00383 1043 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 23 243 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma17g00383 1043 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 737 1039 - -
Gma17g00383 1043 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 675 734 - -
Gma17g00383 1043 SMART AAA_5 824 1020 IPR003593 -
Gma17g00383 1043 SMART AAA_5 322 450 IPR003593 -
Gma17g00383 1043 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 789 1036 IPR027417 -
Gma17g00383 1043 Gene3D - 311 351 IPR027417 -
Gma17g00383 1043 Pfam ABC transporter 816 967 IPR003439 GO:0005524
Gma17g00383 1043 Pfam ABC transporter transmembrane region 675 732 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma17g00383 1043 Pfam ABC transporter transmembrane region 567 672 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma17g00383 1043 Pfam ABC transporter transmembrane region 55 239 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma17g00383 1043 Pfam ABC transporter 314 354 IPR003439 GO:0005524
Gma17g00383 1043 Gene3D ABC transporter type 1, transmembrane domain 503 786 IPR036640 GO:0005524|GO:0016021
Gma17g00383 1043 PANTHER - 26 224 - -
Gma17g00383 1043 PANTHER - 352 673 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00383 Gma-Chr17 3107203 3114426 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00383 26 1042 Calmodulin-binding Proteins AT2G36910 34.046 0.0 583
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00383 K05658 - gmx:100776122 1176.77