Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00377 ATGGTGATTATAAACCTTGTGAAGAAGAAGAAGAAGAGCGAGAGAGAAGGAATGCGACTTGGGAAATACGACTTGGGTAGGACTCTTGGTGAGGGCAATTTTGGCAAAGTCAAGTTCGCTAGGAACACTGATTCTGGCCAAGCTTTTGCTGTTAAGATCATTGACAAGAACACCATCGTCGATATCAACATCACCAATCAGATAATTAGGGAAATAGCGACCTTAAAGCTCCTACGGCATCCCAACGTTGTTAGATTATATGAGGTCTTGGCTAGCAAAACAAAAATTTATATGGTACTTGAGTACGTGAATGGAGGGGAGTTATTTGACATAATTgcatccaaaggtaaacacatcgaaggtgaaggtagaaagctgttccaacagttaattgatggggtgagctactgccacactaaaggtgtcttccacagggatctcaagcttgagaatgtactagtggataacaaagggaacatcaaaataactgattttggtcttagtgctttaccccagcatCTTAGGGAAGATGGATTGCTGCATACAACTTGTGGAAGTCCCAATTATGTTGCACCAGAGGTACTTGCTAATAAGGGCTATGACGGTGCAACATCAGATACATGGTCATGTGGTGTTATATTGTATGTGATCCTAACAGGACACTTACCTTTTGACGATAGAAATCTTGTAGTTCTCTATCAGAAGATTTTTAAAGGAGATGTTCAGATACCAAAATGGCTAACACCGGGTGCACGGAATATGATAAGGAGAATTCTTGATCCTAACCCCGAAACACGGATAACAATGGCTGGGATCAAAGAAGATCCATGGTTCAAGAAGGGTTACATTCCAGTAAATCCTGAGGATGAGGATGTATATGTTGACCAAGAAGCCTTTTCCATCCATGAACAGCCAAATGAAGCAGAACAGAGGAATTCAGGATCACCATCCCTAATCAATGCATTTCAGTTGATAGGGATGTCTTCATGCTTAGACCTCTCTGGCTTTTTTGAGAAAGAGGATGTTTCTGAGAGAAAGATAAGATTTGCGTCAAATCTTTCGGTTAAAGATCTGATCGAGAGGATTGAAGATACTGCGACAGAAATGGAATTTAGAGTCGAGAAGAAAAATGGCAAATTGAAAGTGATCCGAGAGAACAAAGTGCACAAAACTCTTGGCTGCCTCTCAGTGGTAGTAGAGGTGTTTGGAATAAGCTCATCATTGTATGTAGTAGAATTAAGGAAGTCTTATGGAGATGGTTCTGTATATAAACAGTTATGCAATAAATTATTAAATGATTTGGGAATTCCCCCCAAGCAACCGCTAGTGAGATCAGCAGCAAATTAG 1347 0.3474 MVIINLVKKKKKSEREGMRLGKYDLGRTLGEGNFGKVKFARNTDSGQAFAVKIIDKNTIVDINITNQIIREIATLKLLRHPNVVRLYEVLASKTKIYMVLEYVNGGELFDIIASKGKHIEGEGRKLFQQLIDGVSYCHTKGVFHRDLKLENVLVDNKGNIKITDFGLSALPQHLREDGLLHTTCGSPNYVAPEVLANKGYDGATSDTWSCGVILYVILTGHLPFDDRNLVVLYQKIFKGDVQIPKWLTPGARNMIRRILDPNPETRITMAGIKEDPWFKKGYIPVNPEDEDVYVDQEAFSIHEQPNEAEQRNSGSPSLINAFQLIGMSSCLDLSGFFEKEDVSERKIRFASNLSVKDLIERIEDTATEMEFRVEKKNGKLKVIRENKVHKTLGCLSVVVEVFGISSSLYVVELRKSYGDGSVYKQLCNKLLNDLGIPPKQPLVRSAAN 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00377 448 ProSiteProfiles NAF domain profile. 314 338 IPR018451 GO:0007165
Gma17g00377 448 CDD CIPK_C 320 431 - -
Gma17g00377 448 SUPERFAMILY Protein kinase-like (PK-like) 20 290 IPR011009 -
Gma17g00377 448 PANTHER SERINE/THREONINE KINASE 15 445 - -
Gma17g00377 448 ProSiteProfiles Protein kinase domain profile. 23 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma17g00377 448 ProSitePatterns Protein kinases ATP-binding region signature. 29 52 IPR017441 GO:0005524
Gma17g00377 448 Gene3D Transferase(Phosphotransferase) domain 1 15 321 - -
Gma17g00377 448 Gene3D Kinase associated domain 1, KA1 322 435 - -
Gma17g00377 448 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 15 445 - -
Gma17g00377 448 ProSitePatterns Serine/Threonine protein kinases active-site signature. 142 154 IPR008271 GO:0004672|GO:0006468
Gma17g00377 448 Pfam Protein kinase domain 23 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma17g00377 448 Pfam NAF domain 316 375 IPR004041 GO:0007165
Gma17g00377 448 SMART serkin_6 23 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00377 Gma-Chr17 3054884 3060163 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00377 86 443 CBL-interacting serine-threonine protein kinases AT3G17510 68.232 8.18e-171 482
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Gma17g00377 Pkinase 2.1e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00377 K07198 - gmx:100805710 893.264
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00377 17 3054884 3060163 Gma17g00377 17 3054884 3060163 ECH
Gma17g00377 17 3054884 3060163 Gma13g00993 13 24035294 24041092 GST
Gma17g00377 17 3054884 3060163 Gma15g01773 15 19857827 19865705 PCT
Gma15g01773 15 19857827 19865705 Gma17g00377 17 3054884 3060163 PCT