Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00368 ATGGGTTGCTTTGGCTTCTGCAAAGGAGATGATAGTGTTACAGTTGCTGACAGAGGACCTTTCATGCAAAGCACTCCTACTGGGAACCCCAGTTATCATGGAAGACACACAGCAGTAACTGCTCCTCGGACTATAAATTTTCAACCTATTGCTGTCCCTTCCATCACAGTAGATGAATTGAAGTCTTTGACAGATAATTTTGGCTCAAAATATTTCATTGGTGAGGGTGCATATGGGAAAGTATATCAAGCCACATTGAAAAATGGGCATGCAGTAGTAATAAAAAAGTTAGATTCCAGTAATCAGCCAGAGCAGGAATTTCTTTCTCAGGTCTCCATCGTATCAAGGCTAAAGCATGAAAACGTTGTCGAGCTTGTTAACTATTGTGTTGATGGTCCTTTCCGTGCCCTTGCCTACGAGTATGCTCCTAAAGGATCCCTTCACGATATTCTACATGGACGCAAAGGTGTCAAGGGTGCACAACCTGGTCCAGTTCTCTCATGGGCTCAGAGAGTTAAAATTGCTGTTGGAGCAGCCAGGGGACTTGAATATCTTCATGAAAAGGCAGAGATTCATATCATCCATCGTTACATTAAGTCTAGTAACATACTTCTTTTTGATGATGATGTTGCAAAGGTTGCTGATTTTGATTTGTCAAATCAAGCCCCTGATGCAGCAGCACGTCTTCATTCTACTCGTGTTCTTGGGACCTTTGGTTATCATGCTCCAGAATATGCAATGACTGGACAACTCACTTCAAAAAGTGATGTTTATAGCTTTGGAGTTATACTGCTGGAACTCTTAACGGGGCGTAAACCAGTGGATCATACACTGCCACGAGGACAGCAAAGCCTTGTGACTTGGGCAACACCAAAGCTTAGTGAAGATAAGGTGAAGCAGTGTGTTGATGTTAGACTAAAGGGAGAGTACCCTTCAAAATCAGTTGCAAAGATGGCTGCTGTTGCTGCATTGTGTGTGCAATATGAAGCTGAGTTTCGACCAAATATGAGCATTATAGTGAAAGCTCTACAGCCTCTACTGAATACTCGTTCTGTTCACTCAAAGGAAGCACCCAAGATGTAA 1083 0.4266 MGCFGFCKGDDSVTVADRGPFMQSTPTGNPSYHGRHTAVTAPRTINFQPIAVPSITVDELKSLTDNFGSKYFIGEGAYGKVYQATLKNGHAVVIKKLDSSNQPEQEFLSQVSIVSRLKHENVVELVNYCVDGPFRALAYEYAPKGSLHDILHGRKGVKGAQPGPVLSWAQRVKIAVGAARGLEYLHEKAEIHIIHRYIKSSNILLFDDDVAKVADFDLSNQAPDAAARLHSTRVLGTFGYHAPEYAMTGQLTSKSDVYSFGVILLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVKQCVDVRLKGEYPSKSVAKMAAVAALCVQYEAEFRPNMSIIVKALQPLLNTRSVHSKEAPKM 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00368 360 Pfam Protein tyrosine and serine/threonine kinase 73 343 IPR001245 GO:0004672|GO:0006468
Gma17g00368 360 ProSitePatterns Protein kinases ATP-binding region signature. 73 96 IPR017441 GO:0005524
Gma17g00368 360 CDD STKc_IRAK 73 346 - -
Gma17g00368 360 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 1 355 - -
Gma17g00368 360 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 1 355 - -
Gma17g00368 360 Gene3D Transferase(Phosphotransferase) domain 1 143 359 - -
Gma17g00368 360 Gene3D Phosphorylase Kinase; domain 1 33 141 - -
Gma17g00368 360 ProSiteProfiles Protein kinase domain profile. 67 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma17g00368 360 PIRSF ILK 32 357 - -
Gma17g00368 360 SUPERFAMILY Protein kinase-like (PK-like) 45 343 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00368 Gma-Chr17 3004028 3008587 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00368 48 349 Receptor kinase-like Gene Family AT4G02010 48.101 1.30e-87 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Gma17g00368 PK_Tyr_Ser-Thr 1.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00368 K13436 - gmx:547596 709.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00368 17 3004028 3008587 Gma17g00368 17 3004028 3008587 ECH