Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00362 ATGAATCTAACCCACAATCCAATCTCCTTACTTAGCGGCTTTTCCATCATTTACTCACCCCCTGCCACCCGGTTTCCCTATAAAATCGCAACTCAATCCTCACTTCTCAACTCGTTCATATCTCTCTGTTCTCTTCTACCTCTCAAGTTTTTGAAGTATAGAGATGGCAGAGACATTCCTATTTACCTCAGAGACCCAGACAGCAAGGTTGCCTGCGAAACATGCACCAAAACCAACTTGGTCATGGTCTTCGGAGAAATCACGACCAAGGCCAATGTTGACTACGAGAAGATAGTGCGTGACACCTGCAGGAACATCGGCTTTGTCTCAAACGATGTGGGACTGGATGCCGACAACTGCAAGGTCCTCGTCAACATTGAGCAGCAGAGCCCTGATATTGCTCAGGGTGTACACGGCCACCTCACCAAAAAACCTGAAGAAATTGGTGCTGGTGACCAGGGTCACATGTTTGGCTATGCCACTGATGAAACCCCTGAATTGATGCCATTGAGCCATGTTCTTGCAACAAAACTCGGTGCTCGTCTCACCGAGGTTCGCAAGAACGGTACCTGCCCTTGGCTGAGGCCTGATGGGAAGACCCAAGTGACCGTTGAGTATTACAATGACAATGGTGCCAGGGTTCCGGTTCGTGTCCACACCGTGCTAATCTCCACCCAACACGACGAGACTGTCAccaatgacgaaattgctgctgacctcaaagagcatgtgatcaagcctgtgatcccagagaagtaccttgatgagaagaccattttccacttgaacccttcaggccgttttgtcattggtggccctcatggcgatgctggtctcaccggccgcaagatcattatcgatacttatggaggatggggtgctcatggtggtggtgctttctccggcaaggaccctaccaaggttgataggagtggtgcttacattgtgagacaggctgctaagagcattgtggcaagtggacttgccagaagGCAAGCCCCACTCAACCACCACACCTCTCCTCGTTCACGCTACCCCTTTCTGCTCTTCTTCTACCTTTCAAGTTTTAAAAGTATAAAGATGGCAGAGACATTCCTATTTACCTCAGAGTCGGTGAACGAGGGACACCCTGACAAGCTCTGCGACCAAATCTCCGATGCTGTCCTCGACGCTTGCCTCGAGCAGGACCCAGACAGCAAAGTTGCCTGCGAAACATGCACCAAAACCAACTTGGTCATGGTCTTCGGAGAAATCACGACCAAGGCCAACGTTGACTACGAGAAGATAGTGCGTGACACCTGCAGGAACATCGGCTTCGTCTCAAATGATGTGGGACTGGATGCCGACAACTGCAAGGTCCTCGTCAACATTGAGCAGCAGAGCCCTGATATTGCTCAGGGTGTACACGGCCACCTTACCAAAAAACCTGAAGAAATTGGTGCTGGTGACCAGGGTCACATGTTTGGCTATGCCACTGATGAAACCCCTGAATTGATGCCATTGAGCCATGTTCTTGCAACAAAACTCGGTGCTCGTCTCACCGAGGTTCGCAAGAACGGTACCTGCCCTTGGCTGAGGCCTGATGGGAAGACCCAAGTGACCGTTGAGTATTACAATGACAATGGTGCCAGGGTTCCTATTCGTGTACACACCGTGCTAATCTCCACCCAACACGACGAGACTGTCAccaatgacgaaattgctgctgacctcaaagagcatgtgatcaagcctgtgatcccagagaagtaccttgatgagaagaccattttccacttgaacccttcaggccgttttgtcattggtggccctcatggcgatgctggtctcaccggccgcaagatcattatcgatacttatggaggatggggtgctcatggtggtggtgctttctccgggaaggaccctaccaaggttgataggagtggtgcttacattgtgagacaggctgctaagagcattgtggcaagtggacttgccagaaggcctggtatgatctccatcaaccttgatctcaagaggggtggaaataacaggtttttgaagactgctgcctatggacactttggaagagaagaccctgacttcacatgggaagtggtcaaacccctcaagtGGGAGAAGGCCTAA 2130 0.3324 MNLTHNPISLLSGFSIIYSPPATRFPYKIATQSSLLNSFISLCSLLPLKFLKYRDGRDIPIYLRDPDSKVACETCTKTNLVMVFGEITTKANVDYEKIVRDTCRNIGFVSNDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKKPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNDNGARVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRQAPLNHHTSPRSRYPFLLFFYLSSFKSIKMAETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVDYEKIVRDTCRNIGFVSNDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKKPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNDNGARVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRPGMISINLDLKRGGNNRFLKTAAYGHFGREDPDFTWEVVKPLKWEKA 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00362 709 ProSitePatterns S-adenosylmethionine synthase signature 2. 627 635 IPR022631 GO:0004478|GO:0006556
Gma17g00362 709 Pfam S-adenosylmethionine synthetase, C-terminal domain 270 331 IPR022630 GO:0004478|GO:0006556
Gma17g00362 709 Pfam S-adenosylmethionine synthetase, C-terminal domain 601 662 IPR022630 GO:0004478|GO:0006556
Gma17g00362 709 Gene3D - 662 708 - -
Gma17g00362 709 SUPERFAMILY S-adenosylmethionine synthetase 364 470 IPR022636 GO:0004478|GO:0006556
Gma17g00362 709 SUPERFAMILY S-adenosylmethionine synthetase 145 269 IPR022636 GO:0004478|GO:0006556
Gma17g00362 709 Pfam S-adenosylmethionine synthetase, central domain 478 599 IPR022629 GO:0004478|GO:0006556
Gma17g00362 709 Pfam S-adenosylmethionine synthetase, central domain 147 268 IPR022629 GO:0004478|GO:0006556
Gma17g00362 709 PANTHER S-ADENOSYLMETHIONINE SYNTHASE 1 662 709 - -
Gma17g00362 709 TIGRFAM metK: methionine adenosyltransferase 63 331 IPR002133 GO:0004478|GO:0005524|GO:0006556
Gma17g00362 709 TIGRFAM metK: methionine adenosyltransferase 366 662 IPR002133 GO:0004478|GO:0005524|GO:0006556
Gma17g00362 709 Gene3D - 493 601 - -
Gma17g00362 709 ProSitePatterns S-adenosylmethionine synthase signature 1. 149 159 IPR022631 GO:0004478|GO:0006556
Gma17g00362 709 PANTHER S-ADENOSYLMETHIONINE SYNTHETASE 662 709 IPR002133 GO:0004478|GO:0005524|GO:0006556
Gma17g00362 709 PANTHER S-ADENOSYLMETHIONINE SYNTHETASE 64 331 IPR002133 GO:0004478|GO:0005524|GO:0006556
Gma17g00362 709 PANTHER S-ADENOSYLMETHIONINE SYNTHASE 1 361 662 - -
Gma17g00362 709 ProSitePatterns S-adenosylmethionine synthase signature 2. 296 304 IPR022631 GO:0004478|GO:0006556
Gma17g00362 709 Gene3D - 623 661 - -
Gma17g00362 709 Gene3D - 292 333 - -
Gma17g00362 709 SUPERFAMILY S-adenosylmethionine synthetase 270 331 IPR022636 GO:0004478|GO:0006556
Gma17g00362 709 Gene3D - 60 142 - -
Gma17g00362 709 Gene3D - 372 492 - -
Gma17g00362 709 PANTHER S-ADENOSYLMETHIONINE SYNTHASE 1 64 331 - -
Gma17g00362 709 CDD S-AdoMet_synt 65 331 - -
Gma17g00362 709 ProSitePatterns S-adenosylmethionine synthase signature 1. 480 490 IPR022631 GO:0004478|GO:0006556
Gma17g00362 709 SUPERFAMILY S-adenosylmethionine synthetase 476 600 IPR022636 GO:0004478|GO:0006556
Gma17g00362 709 PANTHER S-ADENOSYLMETHIONINE SYNTHETASE 361 662 IPR002133 GO:0004478|GO:0005524|GO:0006556
Gma17g00362 709 Pfam S-adenosylmethionine synthetase, N-terminal domain 62 131 IPR022628 GO:0004478|GO:0006556
Gma17g00362 709 Pfam S-adenosylmethionine synthetase, N-terminal domain 365 462 IPR022628 GO:0004478|GO:0006556
Gma17g00362 709 SUPERFAMILY S-adenosylmethionine synthetase 62 139 IPR022636 GO:0004478|GO:0006556
Gma17g00362 709 CDD S-AdoMet_synt 366 702 - -
Gma17g00362 709 SUPERFAMILY S-adenosylmethionine synthetase 601 706 IPR022636 GO:0004478|GO:0006556
Gma17g00362 709 Gene3D - 149 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00362 Gma-Chr17 2939657 2945195 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00362 K00789 - gmx:100799139 684.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00362 17 2939657 2945195 Gma17g00362 17 2939657 2945195 ECH
Gma17g00362 17 2939657 2945195 Gma10g01425 10 41316352 41318780 ECH
Gma17g00362 17 2939657 2945195 Gma03g02054 03 46111228 46123354 ECH
Gma17g00362 17 2939657 2945195 Gma19g02094 19 49808583 49810392 ECH