Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00343 ATGAATATGAAAATGAATGTTATTCTGTGCCTCCAGTTCCTATGTTTCTTTCTTTTAAGTACTTTGTTCATTAAAGCATCTGCAATAAATGTGGAAACATATgaatctgatagaataattgatcttcctggccaaccttcaagcccatcagtctcacacttttcaggttacatcactgtcaatgaaaaccatggaagggcccttttctactggttctttgaagctcaatctgaaccatccaagaagcctctccttctctggctcaatggagGACCCGGATGCTCCTCTATTGGGTATGGTGGAGTTGTTGAGATTGGACCTCTTATAGTCAACAAAAATGGGGAAGGACTACATTTCAACACACACTCCTGGAATCAAGAAGCAAATTTGTTATTTGTGGAGTCACCTGTGGGAGTTGGATTTTCTTATACTAATACATCTTCTGATCTCACCAAATTAGAGGATAATTTTGTGGCTGAGGATGCCTACATTTTCTTGGTGAATTGGCTACAAAGATTCCCACAGTTCAAATCCCGGGACTTTTTTATATCAGGAGAAAGCTATGGTGGTCACTATATCCCTCAGCTTGCAGAGTTAATCTTTGATCGAAACAAAGATGGGAGCAAATACCCCTTTATTAATCTTAAAGGTTTTATTGTAGGGAACCCAGAAACTGATGATTACTATGACTATAAAGGCCTTCTTGAATATGCATGGAGCCATGCGGTTATATCAGACCAGCAATACGACAAAGCAAAACAAGTATGTGATTTTAAACAATTTGATTGGTCAAATGAATGCAACAAGGCCATGAACGAAGTCTTCCAAGATTACTCAGAAATTGACATATACAACATTTATGCCCCGTCATGTCTTCTAAACAGCACATCCTCAATAGCTGATGATAGCAACGGTAACGGCCCTGAATCATTTACTAAGGAGAGAAATGATTATAGACTAAAGAGGATGAGAATTTTTGGGGGCTATGACCCTTGTTATTCCAATTATGTAGAAGAATACTTCAATAGAAAAGATGTTCAGTCATCTTTTCATGCAGATACTAAAAGAGACACTAACGTAGCATGGAAGGTTTGCAATAATTCCATATTGAGGACTTACAACTTCTCTGTTTTCTCGGTCCTACCTGTCTACACTAAACTCATCAAAGGTGGCCTTAAGATATGGATTTATAGTGGAGACGCAGATGGAAGAGTGCCGGTGATAGGAACACGATATTGCGTTGAGGCTCTGGGATTACCTTTAAAGTCTAGGTGGCGAACTTGGTACCATGATAATCAGGTTGGAGGAAGGATAGTTGAATATGAAGGGTTGACATATGTGACAGTGAGAGGAGCAGGTCACTTGGTGCCACTGAACAAGCCTAGTGAAGCTCTCTCTCTAATTCATTCTTTCTTAACTGGGCAACATCTTCCTACTACTCATGGATAA 1449 0.3444 MNMKMNVILCLQFLCFFLLSTLFIKASAINVETYESDRIIDLPGQPSSPSVSHFSGYITVNENHGRALFYWFFEAQSEPSKKPLLLWLNGGPGCSSIGYGGVVEIGPLIVNKNGEGLHFNTHSWNQEANLLFVESPVGVGFSYTNTSSDLTKLEDNFVAEDAYIFLVNWLQRFPQFKSRDFFISGESYGGHYIPQLAELIFDRNKDGSKYPFINLKGFIVGNPETDDYYDYKGLLEYAWSHAVISDQQYDKAKQVCDFKQFDWSNECNKAMNEVFQDYSEIDIYNIYAPSCLLNSTSSIADDSNGNGPESFTKERNDYRLKRMRIFGGYDPCYSNYVEEYFNRKDVQSSFHADTKRDTNVAWKVCNNSILRTYNFSVFSVLPVYTKLIKGGLKIWIYSGDADGRVPVIGTRYCVEALGLPLKSRWRTWYHDNQVGGRIVEYEGLTYVTVRGAGHLVPLNKPSEALSLIHSFLTGQHLPTTHG 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00343 482 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 13 479 IPR001563 GO:0004185|GO:0006508
Gma17g00343 482 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 26 13 479 - -
Gma17g00343 482 Gene3D - 332 369 - -
Gma17g00343 482 Pfam Serine carboxypeptidase 43 473 IPR001563 GO:0004185|GO:0006508
Gma17g00343 482 Gene3D - 380 474 - -
Gma17g00343 482 ProSitePatterns Serine carboxypeptidases, histidine active site. 444 461 IPR033124 GO:0004185
Gma17g00343 482 SUPERFAMILY alpha/beta-Hydrolases 35 478 IPR029058 -
Gma17g00343 482 PRINTS Carboxypeptidase C serine protease (S10) family signature 120 132 IPR001563 GO:0004185|GO:0006508
Gma17g00343 482 PRINTS Carboxypeptidase C serine protease (S10) family signature 133 143 IPR001563 GO:0004185|GO:0006508
Gma17g00343 482 PRINTS Carboxypeptidase C serine protease (S10) family signature 169 194 IPR001563 GO:0004185|GO:0006508
Gma17g00343 482 PRINTS Carboxypeptidase C serine protease (S10) family signature 444 457 IPR001563 GO:0004185|GO:0006508
Gma17g00343 482 ProSitePatterns Serine carboxypeptidases, serine active site. 183 190 IPR018202 GO:0004185
Gma17g00343 482 Gene3D alpha/beta hydrolase 33 293 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00343 Gma-Chr17 2742153 2745776 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00343 362 477 Calmodulin-binding Proteins AT2G22960 32.479 1.19e-14 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00343 K16297 - gmx:100815141 995.342
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00343 17 2742153 2745776 Gma17g00343 17 2742153 2745776 ECH
Gma17g00343 17 2742153 2745776 Gma13g01003 13 24137080 24139727 GST