Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00321 atgctccaggcattgatgaatctgttctcgctgtgttggaagccatttggccgcgatgctgctgatcgaatcgattccatcggagttaccggaagagaaggcaaagacggcttgctttggttccgcgacggcggaaaatatggctctggcgatttctccatggccgtcgttcaggccaaccaggttctcgaagaccaGAGCCAGATCGAGTCTGGTCCTCTCGGCACCTTCGTCGGCATCTACGACGGTCACGGAGGACCCGACGCCTCAAGATACGTTTGCGATCACTTGTTTCGCCATTTTCAAGCAATATCGGCTGAGTCACGCGGGGTTGTGACACCTGAGACAATCGAAAGAGCGTTTCGCCAAACAGAAGAGGGGTACACAGCCCTCGTGTCAGGCTCATGGAATGCTCGACCTCAAATTGTAAGTGCTGGGACCTGTTGTCTAGTTGGAGTGATATTTCAGCAGACACTCTTTGTGGCAAACGCTGGAGATTCCCGTGTTGTATTGGGCAAGAAAGTTGGTAACACTGGAGGTATGGCTGCAATTCAGCTGTCTGCAGAACACAATGCAAATCTTGAGGCTGTTAGACAGGAACTTAAAGAATTACACCCACATGATCCCCAAATTGTTGTCCTCAAACACGGAGTGTGGAGAGTAAAAGGCATTATTCAGGTTTCTAGATCTATAGGTGACGTATATTTGAAACATGCACAGTTTAACCGGGAACCACTTAATGCAAAATTCAGACTTCCTGAACCAATGAACATGCCCATCTTGAGTGCTAATCCCACTATTCTTTCTCATCCTCTCCAACCAAATGATTCCTTCCTTATATTCGCATCTGATGGTTTATGGGAGCACTTGAGTAATGAGAAAGCCGTGGATATTGTAAACAGCAATCCACATGCGGGTAGTGCCAAGAGACTTATCAAGGCTGCTCTACACGAAGCAGCAAGAAAACGAGAAATGCGATATTCAGACCTCCGTAAGATTGACAAGAAGACAATCATATTTTGCAAAAGAAGCCACAGAATGGAAAATATACTTGAGTCATAG 1062 0.3701 MLQALMNLFSLCWKPFGRDAADRIDSIGVTGREGKDGLLWFRDGGKYGSGDFSMAVVQANQVLEDQSQIESGPLGTFVGIYDGHGGPDASRYVCDHLFRHFQAISAESRGVVTPETIERAFRQTEEGYTALVSGSWNARPQIVSAGTCCLVGVIFQQTLFVANAGDSRVVLGKKVGNTGGMAAIQLSAEHNANLEAVRQELKELHPHDPQIVVLKHGVWRVKGIIQVSRSIGDVYLKHAQFNREPLNAKFRLPEPMNMPILSANPTILSHPLQPNDSFLIFASDGLWEHLSNEKAVDIVNSNPHAGSAKRLIKAALHEAARKREMRYSDLRKIDKKTIIFCKRSHRMENILES 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00321 353 SUPERFAMILY PP2C-like 61 323 IPR036457 -
Gma17g00321 353 ProSiteProfiles PPM-type phosphatase domain profile. 51 343 IPR001932 -
Gma17g00321 353 PANTHER ALPHABET, ISOFORM E-RELATED 3 338 - -
Gma17g00321 353 CDD PP2Cc 52 323 IPR001932 -
Gma17g00321 353 PANTHER PROTEIN PHOSPHATASE 2C 42-RELATED 3 338 - -
Gma17g00321 353 SMART PP2C_4 38 341 IPR001932 -
Gma17g00321 353 ProSitePatterns PPM-type phosphatase domain signature. 77 85 IPR000222 GO:0043169
Gma17g00321 353 Gene3D - 43 350 IPR036457 -
Gma17g00321 353 Pfam Protein phosphatase 2C 75 323 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00321 Gma-Chr17 2561382 2566749 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00321 1 305 PP2C-type Phosphatase Gene Family AT3G17090 67.732 1.93e-154 435
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00321 K01102 - gmx:100811922 679.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00321 17 2561382 2566749 Gma17g00321 17 2561382 2566749 ECH
Gma17g00321 17 2561382 2566749 Gma15g01299 15 11513334 11519374 PCT
Gma17g00321 17 2561382 2566749 Gma09g00312 09 2948916 2954509 PCT
Gma15g01299 15 11513334 11519374 Gma17g00321 17 2561382 2566749 PCT
Gma09g00312 09 2948916 2954509 Gma17g00321 17 2561382 2566749 PCT