Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00311 ATGGGAACTCCACCAACGGATGAGCTTGTGAAGAAGATCCAACAGCTGGAGGAAGGACACGCGCACCTGAAGCAAGAAATGTCGAAACTAAAACTCTCCGATGTGAGACACGGCCACCATCGCCAGAGGTCGCACTCCGTCTCTCCGCAGCGTTCTAGATTGGGAGCTCCGCCGAAGAAGCGGAGCGATGCACCGGCTGCTGCGTGGAAGCGAGGTTCGTGTTCTTTTAAACAGTCGTCGCCGCTGCAGAGGGAGAGTCGCGGTGGCGGCGATCCTCAAATTCACGGCGGAGGAGAAGAAGCTGCTCCGCGCCGTGGTCCCTCCGCCGTCAATTTCACGGAACGGCAGTATCTTAATATTTTGCGGTCAATGGGACAGTCCGTTCATATATTGGATCTTAACTGTCGCATAATATACTGGAACCGTAGTGCGGAAAATCTATATGGTTATACAGCAGAGGAAGCTCTAGGACAGGATGGGATTGAGCTACTTGTAGACCCTAGGGATTTGGACTTGGCCAATAATACAGTGAATCGTGTTATGATGGGAGAGAGCTGGACAGGGCAATTTCCGGTCAAGAATAAAACAGGGGAGAAGTTTTTAGCTGTAGCGACTAATACACCTTTTTATGACGATGATGGAAGCTTAGTTGGGCTAATTTGTGTCTCTATTGATTTGCGGCCCTTTCTTGAAATGAAAGTTCCAATGCCTACTAGTGTAAGGAACATCGAGTCAGATTCAGATTCAGGTGGAACCCGACCTAGAAGTAGCATTACAAATAAACTTGGCCTTGACACTCAACAGCCGCTTCAAGCTTCTATAGCTTCGAAAATTTCAAATTTGGCATCAAAGGTGGGTAACAAAGTTAAGTCAAGGATCTGGATGGGAGAAAACAATTTGGATCGGGAAAGTGGGAGTGGTGAAAGTCATCATTCTGAGCATAGTTTGTTGGAATCTGTTTTTTTGGAGCAGAGAGAGGATGCTAATTCCAGTGGAGCTAGCACCCCCAGAGGTGATGTGCCACCATCCCATTTTGGTGCGTTTTCTCATGTCGAAGAAAAATCCCAGGGAAAAGCTCTGAGAGAGTCTGGTGATGAGAGTGAAGGAAAATCTATTCATAAAATCATACCTAAGGCTGAAGCCTGGATTCAAAGGAAAACATTATCATGGCCGTGGAGAACAAAAGATCGAGAAGGATCAGATGCAATGAATGTTCGTGTTGCTGGGTCCTGGAGACAGAATGATCAAGAAAATGAATCAGTTAATCAGAAGATTCTTTCTTCTGGCTTGAAGCAAGAAAGCCAGGCAGGTGAAAGTAATCGCCCTACTAACAATGAGGCTTCAGGATCCTGGTCCTCCTTTAATGTTAACAGCACAAGTAGTGCCAGCAGCTGTGGGAGTGCTGGCAGTGGTGCTGTCAATAATAAAGTGGATGTGGACACTGATTGCTTGGATTATGAAATTTTGTGGGAGGACCTGACAATTGGAGAACAAATTGGGCAAGGTTCTTGTGGAACTGTCTATCATGCTCTGTGGTATGGATCAGATGTTGCCGTCAAAGTTTTCTCGAAGCAAGAATATTCAGACGATGTGATACTGTCCTTCAGACAAGAGGTGTCTGTCATGAAAAGACTTCGACACCCAAATATTCTTCTCTACATGGGGGCCGTGACTTCACCTCAACGTCTATGCATTGTGACAGAGTTTCTCCCGCGTGGAAGCTTGTGCCGCTTGTTACACAGAAACACATCTAAACTTGACTGGAGACGGCGAGTTCATATGGCCTTGGATATTGCACGAGGTGTAAATTATCTTCATCATTGTAACCCACCTATCATCCACAGAGATTTGAAGTCATCAAATCTTCTAGTTGATAAGAACTGGACTGTGAAGGTTGGTGATTTTGGTCTTTCACGTCTTAAGCATGAAACATATCTCACAACTAAGACAGGAAGGGGCACGCCTCAATGGATGGCACCGGAAGTTCTTCGTAATGAACCCTCTGATGAGAAATCTGACGTTTACAGCTTTGGAGTAATATTATGGGAAATTGCAACTGAAAAGATACCTTGGGATAATCTCAACTCAATGCAGGAATCTTGCAGGTGA 2109 0.4561 MGTPPTDELVKKIQQLEEGHAHLKQEMSKLKLSDVRHGHHRQRSHSVSPQRSRLGAPPKKRSDAPAAAWKRGSCSFKQSSPLQRESRGGGDPQIHGGGEEAAPRRGPSAVNFTERQYLNILRSMGQSVHILDLNCRIIYWNRSAENLYGYTAEEALGQDGIELLVDPRDLDLANNTVNRVMMGESWTGQFPVKNKTGEKFLAVATNTPFYDDDGSLVGLICVSIDLRPFLEMKVPMPTSVRNIESDSDSGGTRPRSSITNKLGLDTQQPLQASIASKISNLASKVGNKVKSRIWMGENNLDRESGSGESHHSEHSLLESVFLEQREDANSSGASTPRGDVPPSHFGAFSHVEEKSQGKALRESGDESEGKSIHKIIPKAEAWIQRKTLSWPWRTKDREGSDAMNVRVAGSWRQNDQENESVNQKILSSGLKQESQAGESNRPTNNEASGSWSSFNVNSTSSASSCGSAGSGAVNNKVDVDTDCLDYEILWEDLTIGEQIGQGSCGTVYHALWYGSDVAVKVFSKQEYSDDVILSFRQEVSVMKRLRHPNILLYMGAVTSPQRLCIVTEFLPRGSLCRLLHRNTSKLDWRRRVHMALDIARGVNYLHHCNPPIIHRDLKSSNLLVDKNWTVKVGDFGLSRLKHETYLTTKTGRGTPQWMAPEVLRNEPSDEKSDVYSFGVILWEIATEKIPWDNLNSMQESCR 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00311 702 MobiDBLite consensus disorder prediction 325 373 - -
Gma17g00311 702 ProSitePatterns Serine/Threonine protein kinases active-site signature. 612 624 IPR008271 GO:0004672|GO:0006468
Gma17g00311 702 TIGRFAM sensory_box: PAS domain S-box protein 114 226 IPR000014 -
Gma17g00311 702 MobiDBLite consensus disorder prediction 240 264 - -
Gma17g00311 702 MobiDBLite consensus disorder prediction 408 452 - -
Gma17g00311 702 PANTHER SERINE/THREONINE-PROTEIN KINASE DDB_G0282963 ISOFORM X1-RELATED 28 698 - -
Gma17g00311 702 CDD STKc_MAP3K-like 499 698 - -
Gma17g00311 702 SMART serkin_6 493 702 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma17g00311 702 SUPERFAMILY PYP-like sensor domain (PAS domain) 113 225 IPR035965 -
Gma17g00311 702 Pfam Protein tyrosine and serine/threonine kinase 493 695 IPR001245 GO:0004672|GO:0006468
Gma17g00311 702 CDD PAS 124 226 IPR000014 -
Gma17g00311 702 MobiDBLite consensus disorder prediction 354 373 - -
Gma17g00311 702 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 28 698 - -
Gma17g00311 702 Gene3D Transferase(Phosphotransferase) domain 1 571 702 - -
Gma17g00311 702 ProSiteProfiles PAS repeat profile. 113 184 IPR000014 -
Gma17g00311 702 Pfam PAS domain 129 226 IPR000014 -
Gma17g00311 702 MobiDBLite consensus disorder prediction 19 108 - -
Gma17g00311 702 Gene3D Phosphorylase Kinase; domain 1 486 570 - -
Gma17g00311 702 SUPERFAMILY Protein kinase-like (PK-like) 483 698 IPR011009 -
Gma17g00311 702 MobiDBLite consensus disorder prediction 19 33 - -
Gma17g00311 702 SMART pas_2 115 182 IPR000014 -
Gma17g00311 702 Coils Coil 6 33 - -
Gma17g00311 702 ProSiteProfiles Protein kinase domain profile. 493 702 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma17g00311 702 Gene3D PAS domain 125 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00311 Gma-Chr17 2504085 2511997 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00311 1 698 MAP Kinase Kinase Kinase AT3G06620 57.203 0.0 810
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Gma17g00311 PK_Tyr_Ser-Thr 2.7e-56 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00311 - - gmx:100785569 1362.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00311 17 2504085 2511997 Gma17g00311 17 2504085 2511997 ECH
Gma17g00311 17 2504085 2511997 Gma09g00318 09 2978094 2984472 PCT
Gma09g00318 09 2978094 2984472 Gma17g00311 17 2504085 2511997 PCT