Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00308 ATGGTTGACACTTTCAGTATAGAGAGCAGGCTTCTTATAAGAGAGTTTGATGAAGATAGAGATGTTAAGGTGGTGGGGAAGCTTGAGAAGAACTGTGAGATTGGGACTAAAAAGGGGGTCTCCATTTTCACCAACATGATGGGTGACCCTTTATCTAGGATTAGGTTCTATCCCCTTCATGTTATGTTGGTGGCTGAGCTGCTTGAAAGCAAGGAGCTTGTCGGTGTGGTTCGAGGGTGCATTAAGAGTATGCGAACTCCTTCTGAATCATTGCTGAAGATAGGTTGCATACTAGGCCTTAGGGTCTCTCCTACACACAGGAGAAAGGGGATAGGACTAAAACTTGTCAACTCAGTCGAAGAATGGATGCTGAGAAATGGGGCTGAATATGCATTCCTAGCAACAGAAAAGAACAATGATGCCTCTATAAACCTATTTACCAACAAATGCAAATACGTGAGCCTCAGCTCACTTGTCATATTTGTCCATCCAATTATTAGTTTCCCTGCAAAGCACATTCCTAAGGATATAAAAATTGAGAAGGTGAACATGGAGCAGGCAATTTCCTTATACAGAAGAACCCTTAGGGCCAAAGAGTTGTACCCATTAGACATGGATTCTATTTTGAAGGAGAAGCTCAGCTTGGGAACCTGGGTGAGTTATTACAAAGATGAAGGGTGCAGGCTCAACTTGCAGAGGAATATGGTAGAGAGTGTCGATGAAGACATAATTACCAATGAAATCACAAGCTCATGGATCATCTTTAGCATATGGAATACTTGTGAGGCTTATAGGCTTCAACTTAAAAAGTCTCAGCCACTTAGGTTTCTCCATACAACATTAAATCATGCAAGAGACAAAATCTTCCCTTGTCTGAGAATGTCGGTGAGTGAATCACTCTGCACACCCTTTGGGTTTCTCTTCCTCTATGGACTCCATGGAGAGGGAGAGAACCTTGGGGAGTTAATGGAATCCATATGGAGGTTCACATCAAGGTTGGGAGAAAGCTTGAAGGACTGCAGAGTGGTTATAACTGAGTTAGGGTTTGGGGATGCACTTGTAAACCATGTCCCTCTAACAGCTTCTATGTCATGTATCGATGATATCTGGTACACTAAGAGAATTTCAAGCCACAGTGATGAAAACGATGATGAACTGCTGATGAAGAGACAAATCGGGAACGTGTTCGTTGACCCTAGAGATTTTTAG 1209 0.4251 MVDTFSIESRLLIREFDEDRDVKVVGKLEKNCEIGTKKGVSIFTNMMGDPLSRIRFYPLHVMLVAELLESKELVGVVRGCIKSMRTPSESLLKIGCILGLRVSPTHRRKGIGLKLVNSVEEWMLRNGAEYAFLATEKNNDASINLFTNKCKYVSLSSLVIFVHPIISFPAKHIPKDIKIEKVNMEQAISLYRRTLRAKELYPLDMDSILKEKLSLGTWVSYYKDEGCRLNLQRNMVESVDEDIITNEITSSWIIFSIWNTCEAYRLQLKKSQPLRFLHTTLNHARDKIFPCLRMSVSESLCTPFGFLFLYGLHGEGENLGELMESIWRFTSRLGESLKDCRVVITELGFGDALVNHVPLTASMSCIDDIWYTKRISSHSDENDDELLMKRQIGNVFVDPRDF 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00308 402 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 11 234 IPR000182 GO:0016407
Gma17g00308 402 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 9 147 IPR016181 -
Gma17g00308 402 CDD NAT_SF 62 133 - -
Gma17g00308 402 PANTHER N-ACETYLTRANSFERASE HLS1-LIKE ISOFORM X1-RELATED 3 402 - -
Gma17g00308 402 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 3 402 - -
Gma17g00308 402 Gene3D - 38 162 - -
Gma17g00308 402 Pfam Acetyltransferase (GNAT) family 65 150 IPR000182 GO:0016407
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00308 Gma-Chr17 2478194 2479853 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Gma17g00308 Acetyltransf_1 1.3e-14 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00308 - - gmx:100814448 792.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00308 17 2478194 2479853 Gma09g00323 09 3031278 3033033 PCT
Gma09g00323 09 3031278 3033033 Gma17g00308 17 2478194 2479853 PCT