Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00306 ATGGCGTTTTGGTGGCCGTTGCTCGTTTTAGCATTCGCTTACGGTATTTGTAGGTTCCTTCTCATGCTCATTCCTCCTAAGGTTCCTTCCATCGACGTTGACACTTCcgatgTGTTAGACGATGGAAACCAAGCGCAGGAGAACAGTTTCATATATGTACCTCCGAGGGGAACATCGCAGCAATCAGGCAAGATAGTTCAGTGCTACGAGCCTGCAACTATGAAATATTTGGGATATGTTCCTGCATTGACGCGTGATGAGGTCAAAGACCGAGTGGCAAAAGTAAGGAAGGCGCAAAAAATGTGGGCAAAGTCCAGCTTCAAGCAAAGACGCCTATTTTTGCGTATACTTTTAAAGTATATAATTAAACATCAAGCGCTTATATGCGAAATATCTTCGCGTGATACTGGAAAGACAATGGTAGATGCCTCTTTAGGAGAAATAATGACAACATGTGAGAAGATCAATTGGCTACTGTCAGAGGGTGAGCAGTGGTTAAAGCCTGAATACCGGTCTTCTGGAAGATCAATGCTTCATAAGAGAGCTAAAGTAGAATTTCATCCCCTTGGTGTTATTGGAGCCATTGTTTCATGGAATTATCCCTTCCACAATATTTTTAATCCTATGCTGGCTGCAATTTTTTCTGGAAACGGTATTGTGATTAAGATATCAGAACATGCAAGTTGGTCTGGATGCTTCTACTTCCGGATCATCCAATCAGCCCTTGCTGCCATAGGAGCTCCAGAGGACCTTGTTGAGGTGATAACAGGGTTTGCTGAAACAGGAGAAGCATTAGTATCTTCTGTTGATAAAGTCATATTTGTTGGATCGCCTGGTGTTGGTAAGATGATAATGAACAATGCTGCTAACACTCTTACACCAGTGACACTGGAGCTTGGTGGGAAAGATGCATTTATTGTTTGTGAAGACGTAGATCTGGACCATGTTGCACAAATTGCTGTCAGGGCTGTACTTCAGTCAAGTGGACAGAACTGTGCTGGGGCAGAGCGATTTTATGTCCATAGGGAAATATATTCTTCTTTTGTTAGCTTAGTTACCAAAATTGTGAAGTCTGTTACAGCTGGCCCACCACTTGTTGGAAAGTATGATATGGGAGCTTTATGCATGCATGAGCATTCTGAAAAGCTTGAAGGCCTTGTAAATGATGCTTTAGACAAAGGAGCTGAAATTGTTGCCCGTGGGAGTTTTGGACATATTGGTGAAGACGCAGTTGATCAATATTTCCCCCCTACTGTGATTGTGAATGTGAACCACACAATGAGATTGATGCAAGAAGAGGCATTTGGACCAATCATGCCGATAATGAAATTCAGCTCTGATGAGGAGGTTGTCAGGCTTGCAAATGAGTCAAAATATGGGCTCGGCTGTGCTGTTTTCTCAGGCAATCAGAGTCGTGCCAGAGAGATAGCTTCACAGATACATGCTGGGGTAGCTGCGGTTAATGATTTTGCATCAACATACATGTGTCAGTCCCTACCATTTGGGGGTGTGAAACATAGTGGATTTGGACGATTTGGTGGTGTAGAAGGTTTGCGAGCTTGCTGTCTTGTTAAAGCAGTTGCTGAAGATCGATGGTGGCCATTTGTCAAAACCAAGATACCTAAGCCTATTCAGTATCCTGTTGCAGAGAATGGATTCGAATTTCAGGAGTCACTTGTTGAAGCGCTTTATGGTATTGGCATATGGGACCGTTTGCGAGCATTAGTAAACGTTTTAAAAATGCTTACTGAGCAGCATCCTGGTGGCGGCGGCAAGAGAAGAAATGACTGA 1791 0.4316 MAFWWPLLVLAFAYGICRFLLMLIPPKVPSIDVDTSDVLDDGNQAQENSFIYVPPRGTSQQSGKIVQCYEPATMKYLGYVPALTRDEVKDRVAKVRKAQKMWAKSSFKQRRLFLRILLKYIIKHQALICEISSRDTGKTMVDASLGEIMTTCEKINWLLSEGEQWLKPEYRSSGRSMLHKRAKVEFHPLGVIGAIVSWNYPFHNIFNPMLAAIFSGNGIVIKISEHASWSGCFYFRIIQSALAAIGAPEDLVEVITGFAETGEALVSSVDKVIFVGSPGVGKMIMNNAANTLTPVTLELGGKDAFIVCEDVDLDHVAQIAVRAVLQSSGQNCAGAERFYVHREIYSSFVSLVTKIVKSVTAGPPLVGKYDMGALCMHEHSEKLEGLVNDALDKGAEIVARGSFGHIGEDAVDQYFPPTVIVNVNHTMRLMQEEAFGPIMPIMKFSSDEEVVRLANESKYGLGCAVFSGNQSRAREIASQIHAGVAAVNDFASTYMCQSLPFGGVKHSGFGRFGGVEGLRACCLVKAVAEDRWWPFVKTKIPKPIQYPVAENGFEFQESLVEALYGIGIWDRLRALVNVLKMLTEQHPGGGGKRRND 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00306 596 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 1 561 - -
Gma17g00306 596 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 325 336 IPR016160 GO:0016491
Gma17g00306 596 SUPERFAMILY ALDH-like 60 528 IPR016161 GO:0016491
Gma17g00306 596 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 297 304 IPR029510 GO:0016491
Gma17g00306 596 PANTHER ALDEHYDE DEHYDROGENASE-LIKE PROTEIN YHR039C-RELATED 1 561 - -
Gma17g00306 596 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 66 525 IPR016162 GO:0016491
Gma17g00306 596 Pfam Aldehyde dehydrogenase family 60 527 IPR015590 GO:0016491
Gma17g00306 596 CDD ALDH_F15-22 69 531 - -
Gma17g00306 596 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 305 500 IPR016163 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00306 Gma-Chr17 2455749 2462170 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00306 1 595 Aldehyde Dehydrogenase Gene Family AT3G66658 78.824 0.0 1018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00306 - - gmx:100806954 1202.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00306 17 2455749 2462170 Gma17g00306 17 2455749 2462170 ECH