Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00273 ATGGGGAGAATGGGAAAAGAATCAGACTCCAAGACCAAGTTGGTATTAGAGATTTGCTCCATTTCCACGCGTTCTGTGCTCTGTGTTCATCATACACTTCTCTCAAAACCTTTCATTGACTGGTATTGCATTCTTGGAGTGGAAGAAAATGCAGGGGTGAATGCCATTCGCAAGAGGTACCATAAACTGGCCTTACAAGTTCACCCAGATAAGAATAAGCATCCCAATGCTGAAATTGCTTTCAAGCTCGTTTCTGAGGCATATGCATGTCTATCTAATGCAGCAAAGAGAAAAGCCTTTGACTTGGAGAGATGTAAGCATTTTTGCTTCGAGTGCAAAAGAATACCATATACATCGAGCAATGTCCCTGGCAATTCAAGTGGGTCAGTTTTCAAGGCATGGAATATGATCACCAGATCAAGATCTTTTAAACTTTGGAGAAATATTAGGGACATGAGAGAAAGATTCATGGACGAGGCTAAGGTGATAGAGAACTGTTTGCGAACAAATTCAATGTCAAGGAAAGAATCTCCACCCTATGATTCGGCTGGCTTTCTACATAGAAGCAAGTCAATGCATAGATTCGAGAAAGAAACCCCAGTTTTCAACCCATCGGATTACTTGTACCAAGGCTACCCTCATCTAAGGAGCAATATTTACAAGAATTCTTCAACATTTTGGTACTTGCAGAGAAATAGTATGCTTCACAACGAAAAGGGAGGAGCGTTGCATGCCTCCCCAGTTTTTGATGTCAAATCAAGGAATTTGTTTGCCAGCAAATTCACTTTTGTCCCATCAAAATGTTAG 807 0.4089 MGRMGKESDSKTKLVLEICSISTRSVLCVHHTLLSKPFIDWYCILGVEENAGVNAIRKRYHKLALQVHPDKNKHPNAEIAFKLVSEAYACLSNAAKRKAFDLERCKHFCFECKRIPYTSSNVPGNSSGSVFKAWNMITRSRSFKLWRNIRDMRERFMDEAKVIENCLRTNSMSRKESPPYDSAGFLHRSKSMHRFEKETPVFNPSDYLYQGYPHLRSNIYKNSSTFWYLQRNSMLHNEKGGALHASPVFDVKSRNLFASKFTFVPSKC 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00273 268 CDD DnaJ 40 93 IPR001623 -
Gma17g00273 268 Pfam DnaJ domain 40 101 IPR001623 -
Gma17g00273 268 PRINTS DnaJ domain signature 42 60 IPR001623 -
Gma17g00273 268 PRINTS DnaJ domain signature 60 75 IPR001623 -
Gma17g00273 268 PRINTS DnaJ domain signature 76 96 IPR001623 -
Gma17g00273 268 PANTHER BNAC03G44070D PROTEIN 7 255 - -
Gma17g00273 268 Gene3D DnaJ domain 39 161 IPR036869 -
Gma17g00273 268 ProSiteProfiles dnaJ domain profile. 40 104 IPR001623 -
Gma17g00273 268 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 7 255 - -
Gma17g00273 268 ProSitePatterns Nt-dnaJ domain signature. 81 100 IPR018253 -
Gma17g00273 268 SMART dnaj_3 39 96 IPR001623 -
Gma17g00273 268 SUPERFAMILY Chaperone J-domain 29 103 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00273 Gma-Chr17 2205553 2206755 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00273 11 101 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 36.275 4.40e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00273 - - gmx:100801809 555.444
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00273 17 2205553 2206755 Gma17g00273 17 2205553 2206755 ECH
Gma17g00273 17 2205553 2206755 Gma15g01372 15 12249595 12251461 PCT
Gma17g00273 17 2205553 2206755 Gma09g00371 09 3475171 3476488 PCT
Gma15g01372 15 12249595 12251461 Gma17g00273 17 2205553 2206755 PCT
Gma09g00371 09 3475171 3476488 Gma17g00273 17 2205553 2206755 PCT